Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.47■□□□□ 0.39
CHAMP1Q96JM3 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 AGGF1P1-201ENST00000509500 2073 ntBASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 AC027369.6-201ENST00000525520 931 ntBASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHAMP1Q96JM3 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CHAMP1Q96JM3 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CHAMP1Q96JM3 TUBB3P1-201ENST00000405796 1332 ntBASIC17.46■□□□□ 0.38
CHAMP1Q96JM3 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CHAMP1Q96JM3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CHAMP1Q96JM3 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 SDHAP3-202ENST00000515467 728 ntBASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 AC004449.1-201ENST00000564240 433 ntBASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 AC009407.1-201ENST00000568958 598 ntBASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHAMP1Q96JM3 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHAMP1Q96JM3 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.44■□□□□ 0.38
CHAMP1Q96JM3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC17.44■□□□□ 0.38
CHAMP1Q96JM3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHAMP1Q96JM3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHAMP1Q96JM3 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHAMP1Q96JM3 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHAMP1Q96JM3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.44■□□□□ 0.38
CHAMP1Q96JM3 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHAMP1Q96JM3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC17.44■□□□□ 0.38
CHAMP1Q96JM3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.44■□□□□ 0.38
CHAMP1Q96JM3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHAMP1Q96JM3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CHAMP1Q96JM3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms