Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PTP4A1Q93096 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PTP4A1Q93096 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 COL6A4P2-202ENST00000504443 2753 ntBASIC13.56□□□□□ -0.24
PTP4A1Q93096 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 CLK3P2-201ENST00000427566 1453 ntBASIC13.56□□□□□ -0.24
PTP4A1Q93096 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PTP4A1Q93096 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 AC118758.2-201ENST00000614242 2813 ntBASIC13.56□□□□□ -0.24
PTP4A1Q93096 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
PTP4A1Q93096 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
PTP4A1Q93096 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PTP4A1Q93096 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PTP4A1Q93096 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PTP4A1Q93096 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 AC009477.1-201ENST00000452936 217 ntBASIC13.56□□□□□ -0.24
PTP4A1Q93096 AC004890.2-204ENST00000481968 304 ntBASIC13.56□□□□□ -0.24
PTP4A1Q93096 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 MEIS3P1-201ENST00000495167 958 ntBASIC13.56□□□□□ -0.24
PTP4A1Q93096 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 AL390955.2-201ENST00000603032 514 ntBASIC13.56□□□□□ -0.24
PTP4A1Q93096 AL391069.4-201ENST00000609583 481 ntBASIC13.56□□□□□ -0.24
PTP4A1Q93096 AL158212.4-201ENST00000624062 1286 ntBASIC13.56□□□□□ -0.24
PTP4A1Q93096 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PTP4A1Q93096 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
PTP4A1Q93096 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PTP4A1Q93096 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PTP4A1Q93096 AC093525.8-201ENST00000624099 1342 ntBASIC13.56□□□□□ -0.24
PTP4A1Q93096 AL158070.2-201ENST00000623713 1621 ntBASIC13.56□□□□□ -0.24
PTP4A1Q93096 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
PTP4A1Q93096 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PTP4A1Q93096 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PTP4A1Q93096 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PTP4A1Q93096 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
PTP4A1Q93096 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
PTP4A1Q93096 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PTP4A1Q93096 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
PTP4A1Q93096 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.55□□□□□ -0.24
PTP4A1Q93096 AC022144.1-201ENST00000602255 1580 ntBASIC13.55□□□□□ -0.24
PTP4A1Q93096 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.55□□□□□ -0.24
PTP4A1Q93096 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
PTP4A1Q93096 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 MIR770-201ENST00000390219 98 ntBASIC13.55□□□□□ -0.24
PTP4A1Q93096 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.55□□□□□ -0.24
PTP4A1Q93096 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.55□□□□□ -0.24
PTP4A1Q93096 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.55□□□□□ -0.24
PTP4A1Q93096 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.55□□□□□ -0.24
PTP4A1Q93096 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.55□□□□□ -0.24
PTP4A1Q93096 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.55□□□□□ -0.24
PTP4A1Q93096 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.55□□□□□ -0.24
PTP4A1Q93096 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.55□□□□□ -0.24
PTP4A1Q93096 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.55□□□□□ -0.24
PTP4A1Q93096 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.55□□□□□ -0.24
PTP4A1Q93096 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.55□□□□□ -0.24
PTP4A1Q93096 AC005498.2-205ENST00000593218 784 ntBASIC13.55□□□□□ -0.24
PTP4A1Q93096 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
PTP4A1Q93096 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.55□□□□□ -0.24
PTP4A1Q93096 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.55□□□□□ -0.24
PTP4A1Q93096 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PTP4A1Q93096 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 327.2 ms