Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC074044.1-201ENST00000609673 707 ntBASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 AC093512.1-201ENST00000617969 520 ntBASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 AL390754.1-201ENST00000619088 582 ntBASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 AL590560.3-201ENST00000623350 461 ntBASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
RTN4IP1Q8WWV3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 REXO1L4P-201ENST00000605109 1937 ntBASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 AC074338.1-201ENST00000416825 156 ntBASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 PMS2P2-201ENST00000425039 1128 ntBASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 AC055876.3-201ENST00000431496 288 ntBASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 ZNF890P-202ENST00000530367 1156 ntBASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 AL844908.2-201ENST00000609461 460 ntBASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 AC138649.4-201ENST00000612222 287 ntBASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 AL109936.8-201ENST00000641772 604 ntBASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 AL359881.3-201ENST00000602640 1721 ntBASIC12.74□□□□□ -0.37
RTN4IP1Q8WWV3 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 AC007787.1-201ENST00000588095 1583 ntBASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 AC015802.1-201ENST00000588104 1449 ntBASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms