Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.17□□□□□ -0.46
LINC00311Q8N616 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00311Q8N616 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00311Q8N616 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
LINC00311Q8N616 AGGF1P1-201ENST00000509500 2073 ntBASIC12.17□□□□□ -0.46
LINC00311Q8N616 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.17□□□□□ -0.46
LINC00311Q8N616 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00311Q8N616 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
LINC00311Q8N616 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00311Q8N616 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00311Q8N616 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00311Q8N616 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LINC00311Q8N616 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LINC00311Q8N616 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 FKBP4P6-201ENST00000457486 1332 ntBASIC12.16□□□□□ -0.46
LINC00311Q8N616 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00311Q8N616 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.16□□□□□ -0.46
LINC00311Q8N616 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.16□□□□□ -0.46
LINC00311Q8N616 RNA5SP486-201ENST00000515961 83 ntBASIC12.16□□□□□ -0.46
LINC00311Q8N616 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.16□□□□□ -0.46
LINC00311Q8N616 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.16□□□□□ -0.46
LINC00311Q8N616 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.16□□□□□ -0.46
LINC00311Q8N616 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00311Q8N616 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
LINC00311Q8N616 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.16□□□□□ -0.46
LINC00311Q8N616 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
LINC00311Q8N616 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
LINC00311Q8N616 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00311Q8N616 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00311Q8N616 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LINC00311Q8N616 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
LINC00311Q8N616 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 AL136172.1-201ENST00000598590 1394 ntBASIC12.16□□□□□ -0.46
LINC00311Q8N616 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
LINC00311Q8N616 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
LINC00311Q8N616 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00311Q8N616 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00311Q8N616 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00311Q8N616 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00311Q8N616 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00311Q8N616 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00311Q8N616 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC00311Q8N616 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC00311Q8N616 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00311Q8N616 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.15□□□□□ -0.46
LINC00311Q8N616 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
LINC00311Q8N616 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00311Q8N616 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00311Q8N616 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00311Q8N616 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.15□□□□□ -0.46
LINC00311Q8N616 AC016694.1-201ENST00000434179 700 ntBASIC12.15□□□□□ -0.46
LINC00311Q8N616 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.15□□□□□ -0.46
LINC00311Q8N616 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.15□□□□□ -0.46
LINC00311Q8N616 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC00311Q8N616 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC00311Q8N616 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
LINC00311Q8N616 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.15□□□□□ -0.46
LINC00311Q8N616 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.15□□□□□ -0.46
LINC00311Q8N616 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC00311Q8N616 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.15□□□□□ -0.46
LINC00311Q8N616 AC132938.2-201ENST00000579188 680 ntBASIC12.15□□□□□ -0.46
LINC00311Q8N616 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.15□□□□□ -0.46
LINC00311Q8N616 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC00311Q8N616 IGHV3-72-202ENST00000621503 303 ntBASIC12.15□□□□□ -0.46
LINC00311Q8N616 AL591163.1-201ENST00000641757 987 ntBASIC12.15□□□□□ -0.46
LINC00311Q8N616 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00311Q8N616 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00311Q8N616 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00311Q8N616 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC00311Q8N616 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00311Q8N616 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
LINC00311Q8N616 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00311Q8N616 AC011840.2-201ENST00000563063 1520 ntBASIC12.15□□□□□ -0.46
LINC00311Q8N616 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00311Q8N616 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC00311Q8N616 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC00311Q8N616 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00311Q8N616 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms