Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SIX5Q8N196 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
SIX5Q8N196 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.44■□□□□ 0.06
SIX5Q8N196 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SIX5Q8N196 FKBP4P6-201ENST00000457486 1332 ntBASIC15.43■□□□□ 0.06
SIX5Q8N196 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.43■□□□□ 0.06
SIX5Q8N196 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 CYP51A1P3-201ENST00000400072 1428 ntBASIC15.43■□□□□ 0.06
SIX5Q8N196 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
SIX5Q8N196 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.43■□□□□ 0.06
SIX5Q8N196 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.43■□□□□ 0.06
SIX5Q8N196 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.43■□□□□ 0.06
SIX5Q8N196 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SIX5Q8N196 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.43■□□□□ 0.06
SIX5Q8N196 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.43■□□□□ 0.06
SIX5Q8N196 AC073150.1-201ENST00000450406 1084 ntBASIC15.43■□□□□ 0.06
SIX5Q8N196 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.43■□□□□ 0.06
SIX5Q8N196 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC15.43■□□□□ 0.06
SIX5Q8N196 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.43■□□□□ 0.06
SIX5Q8N196 RCC2P8-201ENST00000502779 1035 ntBASIC15.43■□□□□ 0.06
SIX5Q8N196 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.43■□□□□ 0.06
SIX5Q8N196 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.43■□□□□ 0.06
SIX5Q8N196 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.43■□□□□ 0.06
SIX5Q8N196 MIR4754-201ENST00000582477 89 ntBASIC15.43■□□□□ 0.06
SIX5Q8N196 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC15.43■□□□□ 0.06
SIX5Q8N196 AC004466.1-201ENST00000599515 1080 ntBASIC15.43■□□□□ 0.06
SIX5Q8N196 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
SIX5Q8N196 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
SIX5Q8N196 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.43■□□□□ 0.06
SIX5Q8N196 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.43■□□□□ 0.06
SIX5Q8N196 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.43■□□□□ 0.06
SIX5Q8N196 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SIX5Q8N196 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.43■□□□□ 0.06
SIX5Q8N196 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SIX5Q8N196 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.43■□□□□ 0.06
SIX5Q8N196 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.43■□□□□ 0.06
SIX5Q8N196 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.43■□□□□ 0.06
SIX5Q8N196 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SIX5Q8N196 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIX5Q8N196 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIX5Q8N196 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIX5Q8N196 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.42■□□□□ 0.06
SIX5Q8N196 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SIX5Q8N196 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SIX5Q8N196 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SIX5Q8N196 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
SIX5Q8N196 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIX5Q8N196 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SIX5Q8N196 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIX5Q8N196 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIX5Q8N196 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIX5Q8N196 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIX5Q8N196 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIX5Q8N196 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SIX5Q8N196 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIX5Q8N196 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SIX5Q8N196 MESTP3-201ENST00000503460 968 ntBASIC15.42■□□□□ 0.06
SIX5Q8N196 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SIX5Q8N196 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.42■□□□□ 0.06
SIX5Q8N196 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.42■□□□□ 0.06
SIX5Q8N196 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.42■□□□□ 0.06
SIX5Q8N196 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.42■□□□□ 0.06
SIX5Q8N196 SAMD11P1-201ENST00000571429 661 ntBASIC15.42■□□□□ 0.06
SIX5Q8N196 SNORD3B-2-202ENST00000571722 791 ntBASIC15.42■□□□□ 0.06
SIX5Q8N196 MIR4783-201ENST00000580343 82 ntBASIC15.42■□□□□ 0.06
SIX5Q8N196 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.42■□□□□ 0.06
SIX5Q8N196 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.42■□□□□ 0.06
SIX5Q8N196 AC009955.4-201ENST00000597192 544 ntBASIC15.42■□□□□ 0.06
SIX5Q8N196 AL358472.3-201ENST00000608147 415 ntBASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms