Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 RNMTL1P1-201ENST00000454103 560 ntBASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 ALG3P1-201ENST00000508806 1114 ntBASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 KRT8P29-201ENST00000420409 1371 ntBASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC60Q8IWA6 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 DUX4L46-201ENST00000566845 751 ntBASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 AC132192.2-201ENST00000596206 1147 ntBASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 BX088702.1-201ENST00000610784 235 ntBASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 AC104640.1-201ENST00000562617 2109 ntBASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 AC144831.1-201ENST00000573312 2656 ntBASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC60Q8IWA6 AL513477.1-201ENST00000602865 2407 ntBASIC16.6■□□□□ 0.25
CCDC60Q8IWA6 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC60Q8IWA6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC60Q8IWA6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC60Q8IWA6 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC60Q8IWA6 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC60Q8IWA6 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC60Q8IWA6 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms