Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 PRYP6-201ENST00000514804 343 ntBASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 AL009183.1-201ENST00000603760 355 ntBASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 AC092474.2-201ENST00000424288 719 ntBASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 NPAP1P7-201ENST00000613027 823 ntBASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 KHSRPP1-201ENST00000427983 1768 ntBASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 AL365181.3-201ENST00000605886 3222 ntBASIC13.68□□□□□ -0.22
CROCCP3Q8IVE0 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms