Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RTTNQ86VV8 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RTTNQ86VV8 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTTNQ86VV8 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.38□□□□□ -0.27
RTTNQ86VV8 KRT8P22-201ENST00000562317 1415 ntBASIC13.38□□□□□ -0.27
RTTNQ86VV8 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTTNQ86VV8 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTTNQ86VV8 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RTTNQ86VV8 PDIA3P1-201ENST00000471856 1510 ntBASIC13.38□□□□□ -0.27
RTTNQ86VV8 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTTNQ86VV8 AC023908.3-201ENST00000564211 3047 ntBASIC13.38□□□□□ -0.27
RTTNQ86VV8 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTTNQ86VV8 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RTTNQ86VV8 USP32P1-208ENST00000506594 1164 ntBASIC13.38□□□□□ -0.27
RTTNQ86VV8 AC026410.3-201ENST00000514280 936 ntBASIC13.38□□□□□ -0.27
RTTNQ86VV8 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RTTNQ86VV8 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.38□□□□□ -0.27
RTTNQ86VV8 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.38□□□□□ -0.27
RTTNQ86VV8 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.38□□□□□ -0.27
RTTNQ86VV8 AC093813.1-201ENST00000605066 256 ntBASIC13.38□□□□□ -0.27
RTTNQ86VV8 AC244093.1-201ENST00000610837 814 ntBASIC13.38□□□□□ -0.27
RTTNQ86VV8 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTTNQ86VV8 REXO1L5P-201ENST00000622260 2098 ntBASIC13.38□□□□□ -0.27
RTTNQ86VV8 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.38□□□□□ -0.27
RTTNQ86VV8 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTTNQ86VV8 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.38□□□□□ -0.27
RTTNQ86VV8 PCDHA3-202ENST00000532566 4594 ntBASIC13.38□□□□□ -0.27
RTTNQ86VV8 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTTNQ86VV8 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTTNQ86VV8 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTTNQ86VV8 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RTTNQ86VV8 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.38□□□□□ -0.27
RTTNQ86VV8 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RTTNQ86VV8 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTTNQ86VV8 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTTNQ86VV8 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RTTNQ86VV8 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTTNQ86VV8 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTTNQ86VV8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTTNQ86VV8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTTNQ86VV8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 LDHBP1-201ENST00000455730 1119 ntBASIC13.37□□□□□ -0.27
RTTNQ86VV8 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RTTNQ86VV8 GAPDHP40-201ENST00000505218 1006 ntBASIC13.37□□□□□ -0.27
RTTNQ86VV8 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 AC015936.2-201ENST00000593177 259 ntBASIC13.37□□□□□ -0.27
RTTNQ86VV8 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 AL033527.5-201ENST00000641382 801 ntBASIC13.37□□□□□ -0.27
RTTNQ86VV8 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTTNQ86VV8 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTTNQ86VV8 CICP14-201ENST00000629111 2732 ntBASIC13.37□□□□□ -0.27
RTTNQ86VV8 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTTNQ86VV8 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTTNQ86VV8 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTTNQ86VV8 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RTTNQ86VV8 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTTNQ86VV8 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTTNQ86VV8 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTTNQ86VV8 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RTTNQ86VV8 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTTNQ86VV8 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTTNQ86VV8 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RTTNQ86VV8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 AC104581.4-201ENST00000623126 3052 ntBASIC13.37□□□□□ -0.27
RTTNQ86VV8 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RTTNQ86VV8 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTTNQ86VV8 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTTNQ86VV8 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTTNQ86VV8 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RTTNQ86VV8 TUBB1P2-201ENST00000422712 1306 ntBASIC13.37□□□□□ -0.27
RTTNQ86VV8 TUBB1P1-201ENST00000503144 1300 ntBASIC13.37□□□□□ -0.27
RTTNQ86VV8 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTTNQ86VV8 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.37□□□□□ -0.27
RTTNQ86VV8 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTTNQ86VV8 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.36□□□□□ -0.27
RTTNQ86VV8 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTTNQ86VV8 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.36□□□□□ -0.27
RTTNQ86VV8 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
RTTNQ86VV8 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms