Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC006449.6-201ENST00000612330 2296 ntBASIC14.32□□□□□ -0.12
RIF1Q5UIP0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 SOD2-205ENST00000444946 917 ntTSL 2 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 RHOQP2-201ENST00000449922 579 ntBASIC14.32□□□□□ -0.12
RIF1Q5UIP0 SLC25A15P1-201ENST00000456738 342 ntBASIC14.32□□□□□ -0.12
RIF1Q5UIP0 AC092896.1-201ENST00000465850 380 ntBASIC14.32□□□□□ -0.12
RIF1Q5UIP0 SLC25A15P3-201ENST00000505530 290 ntBASIC14.32□□□□□ -0.12
RIF1Q5UIP0 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 MT2A-202ENST00000561491 581 ntTSL 2 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 CSTP2-201ENST00000610599 398 ntBASIC14.32□□□□□ -0.12
RIF1Q5UIP0 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC14.32□□□□□ -0.12
RIF1Q5UIP0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 AC092364.2-201ENST00000596710 2692 ntBASIC14.32□□□□□ -0.12
RIF1Q5UIP0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 PCDH8P1-201ENST00000428983 2773 ntBASIC14.31□□□□□ -0.12
RIF1Q5UIP0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.31□□□□□ -0.12
RIF1Q5UIP0 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 AL360270.3-201ENST00000609118 1348 ntBASIC14.31□□□□□ -0.12
RIF1Q5UIP0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 OR10N1P-201ENST00000392758 869 ntBASIC14.31□□□□□ -0.12
RIF1Q5UIP0 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 AC104961.1-201ENST00000427605 771 ntBASIC14.31□□□□□ -0.12
RIF1Q5UIP0 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 PFN2-212ENST00000490975 858 ntTSL 4 BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 AC006986.1-201ENST00000612764 241 ntBASIC14.31□□□□□ -0.12
RIF1Q5UIP0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 OR2R1P-201ENST00000441404 914 ntBASIC14.31□□□□□ -0.12
RIF1Q5UIP0 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 MIR2278-201ENST00000516344 96 ntBASIC14.31□□□□□ -0.12
RIF1Q5UIP0 LY6E-215ENST00000523847 427 ntTSL 3 BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
RIF1Q5UIP0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 AC068880.1-201ENST00000507289 2297 ntBASIC14.3□□□□□ -0.12
RIF1Q5UIP0 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 AC007250.1-201ENST00000608934 338 ntBASIC14.3□□□□□ -0.12
RIF1Q5UIP0 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RIF1Q5UIP0 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms