Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.35□□□□□ -0.43
SPCS3P61009 FDX1P1-201ENST00000449115 551 ntBASIC12.35□□□□□ -0.43
SPCS3P61009 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 SERBP1P3-201ENST00000459980 809 ntBASIC12.35□□□□□ -0.43
SPCS3P61009 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SPCS3P61009 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.35□□□□□ -0.43
SPCS3P61009 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.35□□□□□ -0.43
SPCS3P61009 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.35□□□□□ -0.43
SPCS3P61009 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.35□□□□□ -0.43
SPCS3P61009 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SPCS3P61009 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.35□□□□□ -0.43
SPCS3P61009 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SPCS3P61009 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
SPCS3P61009 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.35□□□□□ -0.43
SPCS3P61009 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 ELL2P1-201ENST00000413990 1906 ntBASIC12.35□□□□□ -0.43
SPCS3P61009 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.35□□□□□ -0.43
SPCS3P61009 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.34□□□□□ -0.43
SPCS3P61009 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.34□□□□□ -0.43
SPCS3P61009 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.34□□□□□ -0.43
SPCS3P61009 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.34□□□□□ -0.43
SPCS3P61009 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
SPCS3P61009 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
SPCS3P61009 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.34□□□□□ -0.43
SPCS3P61009 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SPCS3P61009 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SPCS3P61009 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SPCS3P61009 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SPCS3P61009 MIR940-201ENST00000401276 94 ntBASIC12.34□□□□□ -0.43
SPCS3P61009 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.34□□□□□ -0.43
SPCS3P61009 AC074338.1-201ENST00000416825 156 ntBASIC12.34□□□□□ -0.43
SPCS3P61009 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.34□□□□□ -0.43
SPCS3P61009 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.34□□□□□ -0.43
SPCS3P61009 CEND1P1-201ENST00000451006 455 ntBASIC12.34□□□□□ -0.43
SPCS3P61009 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.34□□□□□ -0.43
SPCS3P61009 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
SPCS3P61009 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.34□□□□□ -0.43
SPCS3P61009 AL079307.3-201ENST00000556114 283 ntBASIC12.34□□□□□ -0.43
SPCS3P61009 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.34□□□□□ -0.43
SPCS3P61009 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.34□□□□□ -0.43
SPCS3P61009 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
SPCS3P61009 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SPCS3P61009 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.34□□□□□ -0.43
SPCS3P61009 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.34□□□□□ -0.43
SPCS3P61009 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.34□□□□□ -0.43
SPCS3P61009 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.34□□□□□ -0.43
SPCS3P61009 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.34□□□□□ -0.43
SPCS3P61009 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.34□□□□□ -0.43
SPCS3P61009 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.34□□□□□ -0.43
SPCS3P61009 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
SPCS3P61009 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS3P61009 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.34□□□□□ -0.43
SPCS3P61009 AC106818.1-201ENST00000623223 3242 ntBASIC12.33□□□□□ -0.43
SPCS3P61009 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
SPCS3P61009 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.43
SPCS3P61009 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.33□□□□□ -0.43
SPCS3P61009 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SPCS3P61009 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SPCS3P61009 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS3P61009 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms