Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CDH4P55283 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH4P55283 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH4P55283 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH4P55283 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH4P55283 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH4P55283 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH4P55283 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CDH4P55283 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
CDH4P55283 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
CDH4P55283 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
CDH4P55283 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CDH4P55283 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CDH4P55283 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH4P55283 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.33■□□□□ 0.05
CDH4P55283 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH4P55283 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.33■□□□□ 0.05
CDH4P55283 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH4P55283 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH4P55283 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH4P55283 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH4P55283 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
CDH4P55283 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CDH4P55283 AC079178.1-201ENST00000420915 656 ntBASIC15.33■□□□□ 0.04
CDH4P55283 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH4P55283 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CDH4P55283 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH4P55283 RPL13AP20-201ENST00000459725 609 ntBASIC15.33■□□□□ 0.04
CDH4P55283 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH4P55283 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CDH4P55283 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.33■□□□□ 0.04
CDH4P55283 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH4P55283 AC131206.1-201ENST00000538078 1211 ntBASIC15.33■□□□□ 0.04
CDH4P55283 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH4P55283 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH4P55283 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH4P55283 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH4P55283 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH4P55283 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.33■□□□□ 0.04
CDH4P55283 AC002472.3-201ENST00000640124 621 ntBASIC15.33■□□□□ 0.04
CDH4P55283 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH4P55283 AL023775.1-201ENST00000454907 1746 ntBASIC15.33■□□□□ 0.04
CDH4P55283 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH4P55283 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH4P55283 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH4P55283 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
CDH4P55283 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH4P55283 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH4P55283 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH4P55283 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH4P55283 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.33■□□□□ 0.04
CDH4P55283 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH4P55283 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH4P55283 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDH4P55283 AC009093.2-202ENST00000620513 2079 ntBASIC15.32■□□□□ 0.04
CDH4P55283 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH4P55283 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH4P55283 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH4P55283 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH4P55283 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDH4P55283 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH4P55283 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH4P55283 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH4P55283 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH4P55283 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH4P55283 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH4P55283 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
CDH4P55283 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH4P55283 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH4P55283 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH4P55283 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH4P55283 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH4P55283 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH4P55283 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH4P55283 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH4P55283 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH4P55283 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
CDH4P55283 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH4P55283 Z93015.1-201ENST00000451718 390 ntBASIC15.32■□□□□ 0.04
CDH4P55283 ALG3P1-201ENST00000508806 1114 ntBASIC15.32■□□□□ 0.04
CDH4P55283 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH4P55283 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH4P55283 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.32■□□□□ 0.04
CDH4P55283 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDH4P55283 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH4P55283 MIR4683-201ENST00000579659 81 ntBASIC15.32■□□□□ 0.04
CDH4P55283 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH4P55283 AC244157.2-201ENST00000616239 1006 ntBASIC15.32■□□□□ 0.04
CDH4P55283 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDH4P55283 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CDH4P55283 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH4P55283 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH4P55283 AC018442.1-201ENST00000421439 2061 ntBASIC15.32■□□□□ 0.04
CDH4P55283 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
CDH4P55283 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH4P55283 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH4P55283 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDH4P55283 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CDH4P55283 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH4P55283 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms