Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE1AP54750 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE1AP54750 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC18.3■□□□□ 0.52
PDE1AP54750 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PDE1AP54750 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE1AP54750 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE1AP54750 AL035633.1-201ENST00000406139 838 ntBASIC18.3■□□□□ 0.52
PDE1AP54750 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.3■□□□□ 0.52
PDE1AP54750 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.3■□□□□ 0.52
PDE1AP54750 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.3■□□□□ 0.52
PDE1AP54750 AC233724.13-201ENST00000598383 410 ntBASIC18.3■□□□□ 0.52
PDE1AP54750 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.3■□□□□ 0.52
PDE1AP54750 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC18.3■□□□□ 0.52
PDE1AP54750 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.3■□□□□ 0.52
PDE1AP54750 AL358472.5-202ENST00000641448 1267 ntBASIC18.3■□□□□ 0.52
PDE1AP54750 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE1AP54750 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PDE1AP54750 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDE1AP54750 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE1AP54750 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE1AP54750 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDE1AP54750 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC18.3■□□□□ 0.52
PDE1AP54750 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE1AP54750 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE1AP54750 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PDE1AP54750 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE1AP54750 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC18.3■□□□□ 0.52
PDE1AP54750 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE1AP54750 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE1AP54750 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
PDE1AP54750 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE1AP54750 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE1AP54750 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE1AP54750 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE1AP54750 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDE1AP54750 AC067930.6-201ENST00000623257 4947 ntBASIC18.29■□□□□ 0.52
PDE1AP54750 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDE1AP54750 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PDE1AP54750 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE1AP54750 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
PDE1AP54750 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE1AP54750 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
PDE1AP54750 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PDE1AP54750 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE1AP54750 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDE1AP54750 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE1AP54750 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.29■□□□□ 0.52
PDE1AP54750 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDE1AP54750 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
PDE1AP54750 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC18.29■□□□□ 0.52
PDE1AP54750 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.29■□□□□ 0.52
PDE1AP54750 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.29■□□□□ 0.52
PDE1AP54750 GCOM2-201ENST00000509133 1104 ntBASIC18.29■□□□□ 0.52
PDE1AP54750 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PDE1AP54750 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.29■□□□□ 0.52
PDE1AP54750 BTNL10-201ENST00000595971 695 ntBASIC18.29■□□□□ 0.52
PDE1AP54750 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.29■□□□□ 0.52
PDE1AP54750 AC105233.6-201ENST00000642093 218 ntBASIC18.29■□□□□ 0.52
PDE1AP54750 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDE1AP54750 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC18.29■□□□□ 0.52
PDE1AP54750 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE1AP54750 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE1AP54750 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.29■□□□□ 0.52
PDE1AP54750 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE1AP54750 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.29■□□□□ 0.52
PDE1AP54750 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC18.29■□□□□ 0.52
PDE1AP54750 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE1AP54750 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PDE1AP54750 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDE1AP54750 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC18.28■□□□□ 0.52
PDE1AP54750 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE1AP54750 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE1AP54750 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE1AP54750 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE1AP54750 FKBP4P6-201ENST00000457486 1332 ntBASIC18.28■□□□□ 0.52
PDE1AP54750 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PDE1AP54750 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE1AP54750 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE1AP54750 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PDE1AP54750 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE1AP54750 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE1AP54750 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
PDE1AP54750 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.28■□□□□ 0.52
PDE1AP54750 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PDE1AP54750 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE1AP54750 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE1AP54750 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDE1AP54750 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.28■□□□□ 0.52
PDE1AP54750 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE1AP54750 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
PDE1AP54750 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDE1AP54750 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.28■□□□□ 0.52
PDE1AP54750 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.28■□□□□ 0.52
PDE1AP54750 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.28■□□□□ 0.52
PDE1AP54750 AP003171.2-201ENST00000528208 925 ntBASIC18.28■□□□□ 0.52
PDE1AP54750 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.28■□□□□ 0.52
PDE1AP54750 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.28■□□□□ 0.52
PDE1AP54750 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.28■□□□□ 0.52
PDE1AP54750 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC18.28■□□□□ 0.52
PDE1AP54750 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms