Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPS1P31327 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPS1P31327 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPS1P31327 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CPS1P31327 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CPS1P31327 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CPS1P31327 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CPS1P31327 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPS1P31327 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPS1P31327 MIR645-201ENST00000385283 94 ntBASIC20.61■□□□□ 0.89
CPS1P31327 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC20.61■□□□□ 0.89
CPS1P31327 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC20.61■□□□□ 0.89
CPS1P31327 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC20.61■□□□□ 0.89
CPS1P31327 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPS1P31327 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC20.61■□□□□ 0.89
CPS1P31327 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CPS1P31327 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPS1P31327 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CPS1P31327 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CPS1P31327 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPS1P31327 C18orf15-201ENST00000623680 2534 ntBASIC20.61■□□□□ 0.89
CPS1P31327 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC20.61■□□□□ 0.89
CPS1P31327 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CPS1P31327 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CPS1P31327 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CPS1P31327 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPS1P31327 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPS1P31327 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPS1P31327 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPS1P31327 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CPS1P31327 API5-208ENST00000531273 1868 ntTSL 2 BASIC20.6■□□□□ 0.89
CPS1P31327 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPS1P31327 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC20.6■□□□□ 0.89
CPS1P31327 WARS-232ENST00000556645 2508 ntTSL 5 BASIC20.6■□□□□ 0.89
CPS1P31327 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPS1P31327 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.6■□□□□ 0.89
CPS1P31327 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPS1P31327 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CPS1P31327 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC20.6■□□□□ 0.89
CPS1P31327 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPS1P31327 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC20.6■□□□□ 0.89
CPS1P31327 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC20.6■□□□□ 0.89
CPS1P31327 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC20.6■□□□□ 0.89
CPS1P31327 BPIFB5P-201ENST00000457066 1099 ntBASIC20.6■□□□□ 0.89
CPS1P31327 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC20.6■□□□□ 0.89
CPS1P31327 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC20.6■□□□□ 0.89
CPS1P31327 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CPS1P31327 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPS1P31327 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPS1P31327 TRMT112P3-201ENST00000580149 358 ntBASIC20.6■□□□□ 0.89
CPS1P31327 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC20.6■□□□□ 0.89
CPS1P31327 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPS1P31327 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPS1P31327 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPS1P31327 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPS1P31327 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPS1P31327 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC20.6■□□□□ 0.89
CPS1P31327 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC20.6■□□□□ 0.89
CPS1P31327 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC20.6■□□□□ 0.89
CPS1P31327 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
CPS1P31327 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
CPS1P31327 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPS1P31327 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC20.59■□□□□ 0.89
CPS1P31327 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPS1P31327 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CPS1P31327 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPS1P31327 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPS1P31327 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CPS1P31327 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC20.59■□□□□ 0.89
CPS1P31327 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC20.59■□□□□ 0.89
CPS1P31327 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC20.59■□□□□ 0.89
CPS1P31327 AC018638.5-201ENST00000450885 754 ntBASIC20.59■□□□□ 0.89
CPS1P31327 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC20.59■□□□□ 0.89
CPS1P31327 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
CPS1P31327 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
CPS1P31327 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC20.59■□□□□ 0.89
CPS1P31327 AC092862.1-201ENST00000541534 533 ntBASIC20.59■□□□□ 0.89
CPS1P31327 KRT8P1-201ENST00000557533 1207 ntBASIC20.59■□□□□ 0.89
CPS1P31327 MT2A-202ENST00000561491 581 ntTSL 2 BASIC20.59■□□□□ 0.89
CPS1P31327 AC110057.1-201ENST00000636031 898 ntBASIC20.59■□□□□ 0.89
CPS1P31327 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.59■□□□□ 0.89
CPS1P31327 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPS1P31327 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPS1P31327 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC20.59■□□□□ 0.89
CPS1P31327 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPS1P31327 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPS1P31327 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPS1P31327 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CPS1P31327 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPS1P31327 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CPS1P31327 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPS1P31327 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPS1P31327 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CPS1P31327 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CPS1P31327 PYY2-201ENST00000315776 282 ntBASIC20.58■□□□□ 0.89
CPS1P31327 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CPS1P31327 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CPS1P31327 AC073869.2-201ENST00000417338 1026 ntBASIC20.58■□□□□ 0.89
CPS1P31327 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC20.58■□□□□ 0.89
CPS1P31327 RN7SL530P-201ENST00000485097 298 ntBASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms