Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC18.28■□□□□ 0.52
TM4SF1P30408 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF1P30408 KRT8P1-201ENST00000557533 1207 ntBASIC18.28■□□□□ 0.52
TM4SF1P30408 HERC2P11-201ENST00000562845 725 ntBASIC18.28■□□□□ 0.52
TM4SF1P30408 AC100756.2-201ENST00000569537 736 ntBASIC18.28■□□□□ 0.52
TM4SF1P30408 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF1P30408 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF1P30408 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF1P30408 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF1P30408 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TM4SF1P30408 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
TM4SF1P30408 AC136621.1-201ENST00000624017 2304 ntBASIC18.28■□□□□ 0.52
TM4SF1P30408 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF1P30408 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
TM4SF1P30408 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF1P30408 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TM4SF1P30408 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF1P30408 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TM4SF1P30408 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF1P30408 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF1P30408 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC18.27■□□□□ 0.52
TM4SF1P30408 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF1P30408 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF1P30408 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.27■□□□□ 0.52
TM4SF1P30408 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF1P30408 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF1P30408 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF1P30408 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC18.27■□□□□ 0.52
TM4SF1P30408 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF1P30408 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF1P30408 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF1P30408 NHP2-202ENST00000314397 599 ntTSL 2 BASIC18.27■□□□□ 0.52
TM4SF1P30408 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF1P30408 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF1P30408 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF1P30408 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC18.27■□□□□ 0.52
TM4SF1P30408 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF1P30408 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC18.27■□□□□ 0.52
TM4SF1P30408 AGPAT5P1-201ENST00000455855 1019 ntBASIC18.27■□□□□ 0.52
TM4SF1P30408 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC18.27■□□□□ 0.52
TM4SF1P30408 AREG-202ENST00000502307 956 ntTSL 5 BASIC18.27■□□□□ 0.52
TM4SF1P30408 AC138701.2-201ENST00000553634 226 ntBASIC18.27■□□□□ 0.52
TM4SF1P30408 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF1P30408 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF1P30408 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF1P30408 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC18.27■□□□□ 0.52
TM4SF1P30408 AC124068.2-201ENST00000569473 1109 ntBASIC18.27■□□□□ 0.52
TM4SF1P30408 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC18.27■□□□□ 0.52
TM4SF1P30408 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
TM4SF1P30408 AC011247.3-201ENST00000603297 438 ntBASIC18.27■□□□□ 0.52
TM4SF1P30408 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TM4SF1P30408 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC18.27■□□□□ 0.52
TM4SF1P30408 AC073592.2-201ENST00000623062 780 ntBASIC18.27■□□□□ 0.52
TM4SF1P30408 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC18.27■□□□□ 0.52
TM4SF1P30408 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC18.27■□□□□ 0.52
TM4SF1P30408 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF1P30408 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.27■□□□□ 0.51
TM4SF1P30408 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TM4SF1P30408 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TM4SF1P30408 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
TM4SF1P30408 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC18.27■□□□□ 0.51
TM4SF1P30408 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TM4SF1P30408 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TM4SF1P30408 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
TM4SF1P30408 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC18.26■□□□□ 0.51
TM4SF1P30408 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF1P30408 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF1P30408 DOC2GP-204ENST00000639052 2548 ntBASIC18.26■□□□□ 0.51
TM4SF1P30408 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
TM4SF1P30408 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.26■□□□□ 0.51
TM4SF1P30408 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF1P30408 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.26■□□□□ 0.51
TM4SF1P30408 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
TM4SF1P30408 AP002353.1-201ENST00000528257 1599 ntBASIC18.26■□□□□ 0.51
TM4SF1P30408 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TM4SF1P30408 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.26■□□□□ 0.51
TM4SF1P30408 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.26■□□□□ 0.51
TM4SF1P30408 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF1P30408 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF1P30408 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.26■□□□□ 0.51
TM4SF1P30408 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TM4SF1P30408 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC18.26■□□□□ 0.51
TM4SF1P30408 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF1P30408 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.26■□□□□ 0.51
TM4SF1P30408 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF1P30408 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.26■□□□□ 0.51
TM4SF1P30408 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
TM4SF1P30408 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF1P30408 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TM4SF1P30408 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC18.26■□□□□ 0.51
TM4SF1P30408 STK16-203ENST00000409516 895 ntTSL 2 BASIC18.26■□□□□ 0.51
TM4SF1P30408 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC18.26■□□□□ 0.51
TM4SF1P30408 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC18.26■□□□□ 0.51
TM4SF1P30408 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC18.26■□□□□ 0.51
TM4SF1P30408 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC18.26■□□□□ 0.51
TM4SF1P30408 CD164-210ENST00000512821 964 ntTSL 2 BASIC18.26■□□□□ 0.51
TM4SF1P30408 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC18.26■□□□□ 0.51
TM4SF1P30408 MIR2392-201ENST00000584881 84 ntBASIC18.26■□□□□ 0.51
TM4SF1P30408 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC18.26■□□□□ 0.51
TM4SF1P30408 AP000322.3-201ENST00000608665 388 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms