Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PTPN6P29350 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.31□□□□□ -0.12
PTPN6P29350 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PTPN6P29350 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTPN6P29350 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.3□□□□□ -0.12
PTPN6P29350 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.3□□□□□ -0.12
PTPN6P29350 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTPN6P29350 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PTPN6P29350 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTPN6P29350 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.3□□□□□ -0.12
PTPN6P29350 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.3□□□□□ -0.12
PTPN6P29350 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
PTPN6P29350 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTPN6P29350 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTPN6P29350 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTPN6P29350 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.3□□□□□ -0.12
PTPN6P29350 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
PTPN6P29350 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTPN6P29350 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PTPN6P29350 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PTPN6P29350 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTPN6P29350 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
PTPN6P29350 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
PTPN6P29350 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.3□□□□□ -0.12
PTPN6P29350 AC026410.3-201ENST00000514280 936 ntBASIC14.3□□□□□ -0.12
PTPN6P29350 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.3□□□□□ -0.12
PTPN6P29350 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.3□□□□□ -0.12
PTPN6P29350 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.3□□□□□ -0.12
PTPN6P29350 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.3□□□□□ -0.12
PTPN6P29350 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.3□□□□□ -0.12
PTPN6P29350 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.3□□□□□ -0.12
PTPN6P29350 AC008494.3-201ENST00000606615 944 ntBASIC14.3□□□□□ -0.12
PTPN6P29350 AC093726.1-201ENST00000608064 963 ntBASIC14.3□□□□□ -0.12
PTPN6P29350 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.3□□□□□ -0.12
PTPN6P29350 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTPN6P29350 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.3□□□□□ -0.12
PTPN6P29350 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.3□□□□□ -0.12
PTPN6P29350 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.3□□□□□ -0.12
PTPN6P29350 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTPN6P29350 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTPN6P29350 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTPN6P29350 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.3□□□□□ -0.12
PTPN6P29350 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
PTPN6P29350 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTPN6P29350 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PTPN6P29350 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.3□□□□□ -0.12
PTPN6P29350 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
PTPN6P29350 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTPN6P29350 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
PTPN6P29350 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PTPN6P29350 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.3□□□□□ -0.12
PTPN6P29350 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PTPN6P29350 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTPN6P29350 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PTPN6P29350 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PTPN6P29350 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PTPN6P29350 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTPN6P29350 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.29□□□□□ -0.12
PTPN6P29350 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTPN6P29350 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.29□□□□□ -0.12
PTPN6P29350 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PTPN6P29350 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
PTPN6P29350 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTPN6P29350 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTPN6P29350 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTPN6P29350 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PTPN6P29350 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
PTPN6P29350 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTPN6P29350 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTPN6P29350 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTPN6P29350 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PTPN6P29350 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PTPN6P29350 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTPN6P29350 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PTPN6P29350 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.29□□□□□ -0.12
PTPN6P29350 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.29□□□□□ -0.12
PTPN6P29350 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PTPN6P29350 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PTPN6P29350 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.29□□□□□ -0.12
PTPN6P29350 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.29□□□□□ -0.12
PTPN6P29350 AC123567.1-201ENST00000548294 1261 ntBASIC14.29□□□□□ -0.12
PTPN6P29350 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.29□□□□□ -0.12
PTPN6P29350 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.29□□□□□ -0.12
PTPN6P29350 AL358472.5-202ENST00000641448 1267 ntBASIC14.29□□□□□ -0.12
PTPN6P29350 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PTPN6P29350 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTPN6P29350 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PTPN6P29350 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.29□□□□□ -0.12
PTPN6P29350 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.29□□□□□ -0.12
PTPN6P29350 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.29□□□□□ -0.12
PTPN6P29350 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PTPN6P29350 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
PTPN6P29350 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.29□□□□□ -0.12
PTPN6P29350 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PTPN6P29350 AC104581.4-201ENST00000623126 3052 ntBASIC14.29□□□□□ -0.12
PTPN6P29350 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.29□□□□□ -0.12
PTPN6P29350 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.29□□□□□ -0.12
PTPN6P29350 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.29□□□□□ -0.12
PTPN6P29350 AC015656.1-201ENST00000624209 3578 ntBASIC14.29□□□□□ -0.12
PTPN6P29350 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms