Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 CCND3-218ENST00000512426 876 ntTSL 211.39□□□□□ -0.593e-7■□□□□ 8.1
RPS3P23396 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.28■■□□□ 1.163e-7■□□□□ 8.1
RPS3P23396 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.663e-7■□□□□ 8.1
RPS3P23396 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.232e-13■□□□□ 8.1
RPS3P23396 LRBA-210ENST00000510841 2288 ntTSL 216.16■□□□□ 0.183e-7■□□□□ 8.1
RPS3P23396 LSM4-206ENST00000600289 1113 ntTSL 215.79■□□□□ 0.123e-7■□□□□ 8.1
RPS3P23396 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -02e-13■□□□□ 8.1
RPS3P23396 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.022e-13■□□□□ 8.1
RPS3P23396 BRD2-213ENST00000495733 3404 ntTSL 214.61□□□□□ -0.072e-13■□□□□ 8.1
RPS3P23396 BRD2-206ENST00000456339 887 ntTSL 414.34□□□□□ -0.112e-13■□□□□ 8.1
RPS3P23396 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.25□□□□□ -0.132e-13■□□□□ 8.1
RPS3P23396 LRBA-212ENST00000514435 2140 ntTSL 214.11□□□□□ -0.153e-7■□□□□ 8.1
RPS3P23396 BRD2-212ENST00000482914 4834 ntTSL 1 (best)13.47□□□□□ -0.252e-13■□□□□ 8.1
RPS3P23396 BRD2-219ENST00000607833 2338 ntAPPRIS ALT2 TSL 1 (best)12.85□□□□□ -0.352e-13■□□□□ 8.1
RPS3P23396 PCBP2-201ENST00000359282 1730 ntTSL 1 (best) BASIC12.62□□□□□ -0.392e-13■□□□□ 8.1
RPS3P23396 PCBP2-208ENST00000546652 823 ntTSL 511.03□□□□□ -0.642e-13■□□□□ 8.1
RPS3P23396 MTR-202ENST00000366577 10529 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.693e-7■□□□□ 8.1
RPS3P23396 MTR-205ENST00000535889 10405 ntTSL 1 (best) BASIC10.76□□□□□ -0.693e-7■□□□□ 8.1
RPS3P23396 PCBP2-203ENST00000437231 3026 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.712e-13■□□□□ 8.1
RPS3P23396 PCBP2-204ENST00000439930 1296 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.712e-13■□□□□ 8.1
RPS3P23396 PCBP2-217ENST00000550520 753 ntTSL 310.62□□□□□ -0.712e-13■□□□□ 8.1
RPS3P23396 PCBP2-223ENST00000552819 1418 ntAPPRIS ALT1 TSL 2 BASIC10.2□□□□□ -0.782e-13■□□□□ 8.1
RPS3P23396 PCBP2-205ENST00000447282 3077 ntTSL 5 BASIC10□□□□□ -0.812e-13■□□□□ 8.1
RPS3P23396 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.892e-13■□□□□ 8.1
RPS3P23396 PCBP2-207ENST00000546463 1457 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.942e-13■□□□□ 8.1
RPS3P23396 PCBP2-213ENST00000548933 1202 ntTSL 1 (best) BASIC8.93□□□□□ -0.982e-13■□□□□ 8.1
RPS3P23396 PCBP2-216ENST00000550192 734 ntTSL 48.63□□□□□ -1.032e-13■□□□□ 8.1
RPS3P23396 PCBP2-222ENST00000552296 1342 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.062e-13■□□□□ 8.1
RPS3P23396 PCBP2-221ENST00000551104 681 ntTSL 38.22□□□□□ -1.092e-13■□□□□ 8.1
RPS3P23396 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC7.63□□□□□ -1.193e-7■□□□□ 8.1
RPS3P23396 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.283e-7■□□□□ 8.1
RPS3P23396 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.373e-7■□□□□ 8.1
RPS3P23396 CALU-204ENST00000493278 589 ntTSL 35.07□□□□□ -1.63e-7■□□□□ 8.1
RPS3P23396 PCBP2-220ENST00000550910 449 ntTSL 31.83□□□□□ -2.122e-13■□□□□ 8.1
RPS3P23396 PCBP2-224ENST00000552980 527 ntTSL 31.23□□□□□ -2.212e-13■□□□□ 8.1
RPS3P23396 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.055e-15■□□□□ 8
RPS3P23396 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.295e-15■□□□□ 8
RPS3P23396 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.84■□□□□ 0.135e-15■□□□□ 8
RPS3P23396 ALDOA-224ENST00000568435 935 ntTSL 1 (best)16.49■□□□□ 0.231e-29■□□□□ 8
RPS3P23396 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.82■■□□□ 1.888e-10■□□□□ 8
RPS3P23396 FTCD-208ENST00000480950 318 ntTSL 324.64■■□□□ 1.548e-13■□□□□ 8
RPS3P23396 LARP1-211ENST00000521577 817 ntTSL 524.13■■□□□ 1.458e-7■□□□□ 8
RPS3P23396 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.238e-7■□□□□ 8
RPS3P23396 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.098e-7■□□□□ 8
RPS3P23396 AKT1-217ENST00000557494 408 ntTSL 221.33■■□□□ 1.018e-7■□□□□ 8
RPS3P23396 XPO6-209ENST00000566073 715 ntTSL 520.98■□□□□ 0.958e-7■□□□□ 8
RPS3P23396 FTCD-207ENST00000469240 458 ntTSL 319.34■□□□□ 0.698e-13■□□□□ 8
RPS3P23396 AKT1-215ENST00000555926 553 ntTSL 318.72■□□□□ 0.598e-7■□□□□ 8
RPS3P23396 SEC63-203ENST00000446496 583 ntTSL 418.03■□□□□ 0.488e-7■□□□□ 8
RPS3P23396 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.438e-7■□□□□ 8
RPS3P23396 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.278e-7■□□□□ 8
RPS3P23396 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.078e-7■□□□□ 8
RPS3P23396 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.078e-7■□□□□ 8
RPS3P23396 WDR6-218ENST00000492780 537 ntTSL 213.61□□□□□ -0.238e-7■□□□□ 8
RPS3P23396 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.248e-10■□□□□ 8
RPS3P23396 SEC63-205ENST00000460009 482 ntTSL 511.81□□□□□ -0.528e-7■□□□□ 8
RPS3P23396 LAMA5-206ENST00000468786 325 ntTSL 29.83□□□□□ -0.848e-13■□□□□ 8
RPS3P23396 SLC26A6-215ENST00000466257 706 ntTSL 38.4□□□□□ -1.068e-13■□□□□ 8
RPS3P23396 SEC63-209ENST00000484803 724 ntTSL 24.45□□□□□ -1.78e-7■□□□□ 8
RPS3P23396 ARPC3-205ENST00000475777 837 ntTSL 27.84□□□□□ -1.156e-15■□□□□ 8
RPS3P23396 ARPC3-202ENST00000426440 349 ntTSL 34.06□□□□□ -1.766e-15■□□□□ 8
RPS3P23396 ARPC3-204ENST00000471641 555 ntTSL 33.01□□□□□ -1.936e-15■□□□□ 8
RPS3P23396 ARPC3-208ENST00000548878 532 ntTSL 51.66□□□□□ -2.146e-15■□□□□ 8
RPS3P23396 ARPC3-207ENST00000547365 308 ntTSL 2-0.07□□□□□ -2.426e-15■□□□□ 8
RPS3P23396 ARPC3-209ENST00000549408 209 ntTSL 5-0.45□□□□□ -2.486e-15■□□□□ 8
RPS3P23396 COPS2-201ENST00000299259 2036 ntTSL 1 (best) BASIC10.43□□□□□ -0.741e-10■□□□□ 8
RPS3P23396 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.731e-10■□□□□ 8
RPS3P23396 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.26□□□□□ -2.051e-10■□□□□ 8
RPS3P23396 COPS2-204ENST00000558545 668 ntTSL 21.14□□□□□ -2.231e-10■□□□□ 8
RPS3P23396 COPS2-208ENST00000561248 575 ntTSL 41.14□□□□□ -2.231e-10■□□□□ 8
RPS3P23396 COPS2-205ENST00000558843 803 ntTSL 1 (best)0.51□□□□□ -2.331e-10■□□□□ 8
Retrieved 71 of 24,271 protein–RNA pairs in 67.2 ms