RNA–Protein interactions for RNA: ENST00000471641.1

ARPC3-204, Transcript of actin related protein 2/3 complex subunit 3, humanhuman

TSL 3

Gene ARPC3, Length 555 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC3-204ENST00000471641 AEBP2Q6ZN18 517 aaPredicted RBP33.79■■■■□ 3
ARPC3-204ENST00000471641 CHIC1Q5VXU3 224 aa31.64■■■□□ 2.66
ARPC3-204ENST00000471641 SENP3Q9H4L4 574 aaPredicted RBP28.97■■■□□ 2.23
ARPC3-204ENST00000471641 PHF23Q9BUL5 403 aaPredicted RBP28.51■■■□□ 2.15
ARPC3-204ENST00000471641 FOXD1Q16676 465 aa27.04■■□□□ 1.92
ARPC3-204ENST00000471641 POTEDQ86YR6 584 aa25.86■■□□□ 1.73
ARPC3-204ENST00000471641 MSH5O43196 834 aa25.57■■□□□ 1.68
ARPC3-204ENST00000471641 PIAS4Q8N2W9 510 aaPredicted RBP25.12■■□□□ 1.61
ARPC3-204ENST00000471641 PLPPR3Q6T4P5 718 aa25■■□□□ 1.59
ARPC3-204ENST00000471641 PPP6R1Q9UPN7 881 aa24.84■■□□□ 1.57
ARPC3-204ENST00000471641 ADRA2BP18089 450 aa24.72■■□□□ 1.55
ARPC3-204ENST00000471641 MAPK8IP2Q13387 824 aaPredicted RBP22.87■■□□□ 1.25
ARPC3-204ENST00000471641 DMRT2Q9Y5R5 561 aa22.87■■□□□ 1.25
ARPC3-204ENST00000471641 SCAF1Q9H7N4 1312 aaKnown RBP22.71■■□□□ 1.23
ARPC3-204ENST00000471641 CACNB1Q02641 598 aaPredicted RBP22.25■■□□□ 1.15
ARPC3-204ENST00000471641 DCAF8L1A6NGE4 600 aa21.92■■□□□ 1.1
ARPC3-204ENST00000471641 HOXD11P31277 338 aaPredicted RBP21.84■■□□□ 1.09
ARPC3-204ENST00000471641 PPP4R3CPQ6ZMV5 832 aa21.83■■□□□ 1.09
ARPC3-204ENST00000471641 RNF39Q9H2S5 420 aa21.74■■□□□ 1.07
ARPC3-204ENST00000471641 CNKSR2Q8WXI2 1034 aa21.57■■□□□ 1.04
ARPC3-204ENST00000471641 RNF216Q9NWF9 866 aaPredicted RBP21.52■■□□□ 1.04
ARPC3-204ENST00000471641 C1QBPQ07021 282 aaKnown RBP21.43■■□□□ 1.02
ARPC3-204ENST00000471641 DNAJC5BQ9UF47 199 aa21.26■□□□□ 0.99
ARPC3-204ENST00000471641 NCBP3Q53F19 620 aaKnown RBP20.85■□□□□ 0.93
ARPC3-204ENST00000471641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.77■□□□□ 0.923e-11■■□□□ 11.4
ARPC3-204ENST00000471641 NPM3O75607 178 aaKnown RBP20.5■□□□□ 0.87
ARPC3-204ENST00000471641 U3KPZ7 1027 aaPredicted RBP20.26■□□□□ 0.83
ARPC3-204ENST00000471641 DSG3P32926 999 aa20.16■□□□□ 0.82
ARPC3-204ENST00000471641 POTEHQ6S545 545 aa20.16■□□□□ 0.82
ARPC3-204ENST00000471641 CAPN15O75808 1086 aa20.13■□□□□ 0.81
ARPC3-204ENST00000471641 SPINK5Q9NQ38 1064 aaPredicted RBP20.12■□□□□ 0.81
ARPC3-204ENST00000471641 SLC4A2P04920 1241 aa19.73■□□□□ 0.75
ARPC3-204ENST00000471641 APLP2Q06481 763 aa19.71■□□□□ 0.75
ARPC3-204ENST00000471641 TRHP20396 242 aaPredicted RBP19.66■□□□□ 0.74
ARPC3-204ENST00000471641 ZNF219Q9P2Y4 722 aaPredicted RBP19.64■□□□□ 0.73
ARPC3-204ENST00000471641 KCNA4P22459 653 aa19.58■□□□□ 0.72
ARPC3-204ENST00000471641 ABCB7O75027 752 aa19.57■□□□□ 0.72
ARPC3-204ENST00000471641 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.55■□□□□ 0.72
ARPC3-204ENST00000471641 HNRNPUL2Q1KMD3 747 aaKnown RBP19.55■□□□□ 0.72
ARPC3-204ENST00000471641 SAMD1Q6SPF0 538 aaPredicted RBP19.39■□□□□ 0.69
ARPC3-204ENST00000471641 RBM42Q9BTD8 480 aaKnown RBP19.28■□□□□ 0.68
ARPC3-204ENST00000471641 CHRDL2Q6WN34 429 aa19.05■□□□□ 0.64
ARPC3-204ENST00000471641 POLA2Q14181 598 aa19.04■□□□□ 0.64
ARPC3-204ENST00000471641 MYCNP04198 464 aaPredicted RBP18.99■□□□□ 0.63
ARPC3-204ENST00000471641 AKT1S1Q96B36 256 aa18.72■□□□□ 0.59
ARPC3-204ENST00000471641 SP7Q8TDD2 431 aaPredicted RBP18.64■□□□□ 0.57
ARPC3-204ENST00000471641 ZBTB12Q9Y330 459 aaPredicted RBP18.63■□□□□ 0.57
ARPC3-204ENST00000471641 ATF5Q9Y2D1 282 aaPredicted RBP18.55■□□□□ 0.56
ARPC3-204ENST00000471641 REM2Q8IYK8 340 aaPredicted RBP18.52■□□□□ 0.56
ARPC3-204ENST00000471641 FOXD4L1Q9NU39 408 aa18.48■□□□□ 0.55
ARPC3-204ENST00000471641 PIP4P2Q8N4L2 257 aa18.47■□□□□ 0.55
ARPC3-204ENST00000471641 OSCARQ8IYS5 282 aa18.39■□□□□ 0.53
ARPC3-204ENST00000471641 SLC4A1APQ9BWU0 796 aaKnown RBP18.39■□□□□ 0.53
ARPC3-204ENST00000471641 HAX1O00165 279 aa18.3■□□□□ 0.52
ARPC3-204ENST00000471641 PITPNM1O00562 1244 aa18.3■□□□□ 0.52
ARPC3-204ENST00000471641 FXR2P51116 673 aaKnown RBP eCLIP18.3■□□□□ 0.52
ARPC3-204ENST00000471641 ATXN8OSP0DMR3 200 aa18.02■□□□□ 0.48
ARPC3-204ENST00000471641 EVX2Q03828 476 aa18.01■□□□□ 0.47
ARPC3-204ENST00000471641 SPDYE2BA6NHP3 402 aa18■□□□□ 0.47
ARPC3-204ENST00000471641 SPDYE6P0CI01 402 aa18■□□□□ 0.47
ARPC3-204ENST00000471641 SPDYE2Q495Y8 402 aa18■□□□□ 0.47
ARPC3-204ENST00000471641 ZBTB22O15209 634 aa17.96■□□□□ 0.47
ARPC3-204ENST00000471641 FBLN2P98095 1184 aa17.92■□□□□ 0.46
ARPC3-204ENST00000471641 PRKAR2AP13861 404 aaKnown RBP17.84■□□□□ 0.45
ARPC3-204ENST00000471641 SPDYE1Q8NFV5 336 aaPredicted RBP17.83■□□□□ 0.44
ARPC3-204ENST00000471641 CLEC11AQ9Y240 323 aa17.79■□□□□ 0.44
ARPC3-204ENST00000471641 C19orf67A6NJJ6 358 aa17.73■□□□□ 0.43
ARPC3-204ENST00000471641 ZNF692Q9BU19 519 aaPredicted RBP17.69■□□□□ 0.42
ARPC3-204ENST00000471641 MKRN4PQ13434 485 aaPredicted RBP17.68■□□□□ 0.42
ARPC3-204ENST00000471641 SSUH2Q9Y2M2 353 aa17.68■□□□□ 0.42
ARPC3-204ENST00000471641 GABBR2O75899 941 aa17.6■□□□□ 0.41
ARPC3-204ENST00000471641 LHX8Q68G74 356 aa17.49■□□□□ 0.39
ARPC3-204ENST00000471641 CHADLQ6NUI6 762 aa17.48■□□□□ 0.39
ARPC3-204ENST00000471641 PRR29P0C7W0 189 aa17.45■□□□□ 0.38
ARPC3-204ENST00000471641 PABPN1Q86U42 306 aaKnown RBP eCLIP17.39■□□□□ 0.37
ARPC3-204ENST00000471641 CD44P16070 742 aaKnown RBP17.23■□□□□ 0.35
ARPC3-204ENST00000471641 CLCN6P51797 869 aa17.23■□□□□ 0.35
ARPC3-204ENST00000471641 FARP1Q9Y4F1 1045 aaPredicted RBP17.22■□□□□ 0.35
ARPC3-204ENST00000471641 POTEIP0CG38 1075 aa17.2■□□□□ 0.34
ARPC3-204ENST00000471641 DCBLD2Q96PD2 775 aa17.02■□□□□ 0.32
ARPC3-204ENST00000471641 ZNF579Q8NAF0 562 aaKnown RBP16.96■□□□□ 0.31
ARPC3-204ENST00000471641 ZRANB1Q9UGI0 708 aa16.91■□□□□ 0.3
ARPC3-204ENST00000471641 CREBZFQ9NS37 354 aa16.86■□□□□ 0.29
ARPC3-204ENST00000471641 STAG3Q9UJ98 1225 aa16.86■□□□□ 0.29
ARPC3-204ENST00000471641 PLSCR2Q9NRY7 297 aa16.78■□□□□ 0.28
ARPC3-204ENST00000471641 GALR2O43603 387 aaPredicted RBP16.76■□□□□ 0.27
ARPC3-204ENST00000471641 OTUD5Q96G74 571 aa16.69■□□□□ 0.26
ARPC3-204ENST00000471641 PAK3O75914 559 aaPredicted RBP16.68■□□□□ 0.26
ARPC3-204ENST00000471641 CSRNP3Q8WYN3 585 aa16.68■□□□□ 0.26
ARPC3-204ENST00000471641 POTEB2H3BUK9 544 aa16.63■□□□□ 0.25
ARPC3-204ENST00000471641 PHF12Q96QT6 1004 aa16.59■□□□□ 0.25
ARPC3-204ENST00000471641 SPDYE4A6NLX3 237 aa16.58■□□□□ 0.24
ARPC3-204ENST00000471641 NPM1P06748 294 aaKnown RBP eCLIP16.58■□□□□ 0.24
ARPC3-204ENST00000471641 MNX1P50219 401 aaPredicted RBP16.5■□□□□ 0.23
ARPC3-204ENST00000471641 PELP1Q8IZL8 1130 aaKnown RBP16.5■□□□□ 0.23
ARPC3-204ENST00000471641 POTEMA6NI47 508 aa16.47■□□□□ 0.23
ARPC3-204ENST00000471641 ASTLQ6HA08 431 aaPredicted RBP16.42■□□□□ 0.22
ARPC3-204ENST00000471641 POTEGQ6S5H5 508 aa16.4■□□□□ 0.22
ARPC3-204ENST00000471641 SLC39A7Q92504 469 aa16.38■□□□□ 0.21
ARPC3-204ENST00000471641 C7P10643 843 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms