Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
MMP8P22894 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
MMP8P22894 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP8P22894 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP8P22894 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
MMP8P22894 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP8P22894 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.77■□□□□ 0.12
MMP8P22894 AL355864.2-201ENST00000447420 863 ntBASIC15.77■□□□□ 0.12
MMP8P22894 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.77■□□□□ 0.12
MMP8P22894 AC132938.2-201ENST00000579188 680 ntBASIC15.77■□□□□ 0.12
MMP8P22894 AC008735.3-201ENST00000596646 500 ntBASIC15.77■□□□□ 0.12
MMP8P22894 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.77■□□□□ 0.12
MMP8P22894 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.77■□□□□ 0.12
MMP8P22894 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.77■□□□□ 0.12
MMP8P22894 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.77■□□□□ 0.12
MMP8P22894 AL591163.1-201ENST00000641757 987 ntBASIC15.77■□□□□ 0.12
MMP8P22894 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.77■□□□□ 0.11
MMP8P22894 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.77■□□□□ 0.11
MMP8P22894 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.77■□□□□ 0.11
MMP8P22894 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MMP8P22894 INE2-201ENST00000630399 1874 ntBASIC15.77■□□□□ 0.11
MMP8P22894 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
MMP8P22894 PCDHA3-202ENST00000532566 4594 ntBASIC15.77■□□□□ 0.11
MMP8P22894 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
MMP8P22894 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
MMP8P22894 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
MMP8P22894 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MMP8P22894 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
MMP8P22894 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MMP8P22894 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MMP8P22894 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
MMP8P22894 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.77■□□□□ 0.11
MMP8P22894 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.77■□□□□ 0.11
MMP8P22894 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.77■□□□□ 0.11
MMP8P22894 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MMP8P22894 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP8P22894 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP8P22894 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP8P22894 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP8P22894 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
MMP8P22894 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
MMP8P22894 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP8P22894 AC092135.3-201ENST00000624151 1846 ntBASIC15.76■□□□□ 0.11
MMP8P22894 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP8P22894 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
MMP8P22894 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP8P22894 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP8P22894 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP8P22894 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP8P22894 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
MMP8P22894 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.76■□□□□ 0.11
MMP8P22894 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
MMP8P22894 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.76■□□□□ 0.11
MMP8P22894 COX5BP8-201ENST00000416911 349 ntBASIC15.76■□□□□ 0.11
MMP8P22894 TMEM14DP-201ENST00000422205 345 ntBASIC15.76■□□□□ 0.11
MMP8P22894 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MMP8P22894 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP8P22894 TTTY23B-201ENST00000442790 549 ntBASIC15.76■□□□□ 0.11
MMP8P22894 GCOM2-201ENST00000509133 1104 ntBASIC15.76■□□□□ 0.11
MMP8P22894 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
MMP8P22894 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
MMP8P22894 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.76■□□□□ 0.11
MMP8P22894 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.76■□□□□ 0.11
MMP8P22894 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.76■□□□□ 0.11
MMP8P22894 IGHV3-72-202ENST00000621503 303 ntBASIC15.76■□□□□ 0.11
MMP8P22894 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.76■□□□□ 0.11
MMP8P22894 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MMP8P22894 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP8P22894 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.76■□□□□ 0.11
MMP8P22894 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.76■□□□□ 0.11
MMP8P22894 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
MMP8P22894 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP8P22894 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.76■□□□□ 0.11
MMP8P22894 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP8P22894 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
MMP8P22894 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP8P22894 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.75■□□□□ 0.11
MMP8P22894 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP8P22894 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP8P22894 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MMP8P22894 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
MMP8P22894 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MMP8P22894 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP8P22894 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.75■□□□□ 0.11
MMP8P22894 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP8P22894 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MMP8P22894 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP8P22894 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP8P22894 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP8P22894 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
MMP8P22894 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP8P22894 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
MMP8P22894 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.75■□□□□ 0.11
MMP8P22894 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.75■□□□□ 0.11
MMP8P22894 FTLP10-202ENST00000505798 471 ntBASIC15.75■□□□□ 0.11
MMP8P22894 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.75■□□□□ 0.11
MMP8P22894 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.75■□□□□ 0.11
MMP8P22894 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.75■□□□□ 0.11
MMP8P22894 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.75■□□□□ 0.11
MMP8P22894 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms