Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KCNA3P22001 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
KCNA3P22001 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.05■□□□□ 0.48
KCNA3P22001 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC18.05■□□□□ 0.48
KCNA3P22001 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.05■□□□□ 0.48
KCNA3P22001 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KCNA3P22001 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KCNA3P22001 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KCNA3P22001 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KCNA3P22001 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
KCNA3P22001 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KCNA3P22001 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KCNA3P22001 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC18.05■□□□□ 0.48
KCNA3P22001 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KCNA3P22001 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KCNA3P22001 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.05■□□□□ 0.48
KCNA3P22001 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
KCNA3P22001 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC18.05■□□□□ 0.48
KCNA3P22001 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC18.05■□□□□ 0.48
KCNA3P22001 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC18.05■□□□□ 0.48
KCNA3P22001 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC18.05■□□□□ 0.48
KCNA3P22001 AC106047.2-201ENST00000511723 743 ntBASIC18.05■□□□□ 0.48
KCNA3P22001 CD164-210ENST00000512821 964 ntTSL 2 BASIC18.05■□□□□ 0.48
KCNA3P22001 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KCNA3P22001 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KCNA3P22001 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KCNA3P22001 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KCNA3P22001 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KCNA3P22001 AC010491.1-201ENST00000563101 2797 ntBASIC18.05■□□□□ 0.48
KCNA3P22001 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KCNA3P22001 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
KCNA3P22001 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KCNA3P22001 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC18.04■□□□□ 0.48
KCNA3P22001 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KCNA3P22001 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KCNA3P22001 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.04■□□□□ 0.48
KCNA3P22001 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.04■□□□□ 0.48
KCNA3P22001 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KCNA3P22001 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
KCNA3P22001 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KCNA3P22001 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
KCNA3P22001 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC18.04■□□□□ 0.48
KCNA3P22001 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
KCNA3P22001 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KCNA3P22001 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC18.04■□□□□ 0.48
KCNA3P22001 SURF4-203ENST00000371991 715 ntTSL 3 BASIC18.04■□□□□ 0.48
KCNA3P22001 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
KCNA3P22001 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KCNA3P22001 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KCNA3P22001 AC073869.2-201ENST00000417338 1026 ntBASIC18.04■□□□□ 0.48
KCNA3P22001 AC108734.2-201ENST00000420887 1069 ntBASIC18.04■□□□□ 0.48
KCNA3P22001 GDNF-207ENST00000515058 764 ntTSL 5 BASIC18.04■□□□□ 0.48
KCNA3P22001 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC18.04■□□□□ 0.48
KCNA3P22001 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC18.04■□□□□ 0.48
KCNA3P22001 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC18.04■□□□□ 0.48
KCNA3P22001 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KCNA3P22001 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KCNA3P22001 KRT8P1-201ENST00000557533 1207 ntBASIC18.04■□□□□ 0.48
KCNA3P22001 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC18.04■□□□□ 0.48
KCNA3P22001 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC18.04■□□□□ 0.48
KCNA3P22001 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
KCNA3P22001 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
KCNA3P22001 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
KCNA3P22001 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
KCNA3P22001 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
KCNA3P22001 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
KCNA3P22001 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
KCNA3P22001 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
KCNA3P22001 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC18.04■□□□□ 0.48
KCNA3P22001 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.04■□□□□ 0.48
KCNA3P22001 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.04■□□□□ 0.48
KCNA3P22001 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KCNA3P22001 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KCNA3P22001 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
KCNA3P22001 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
KCNA3P22001 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
KCNA3P22001 R3HDM2P2-201ENST00000401880 2116 ntBASIC18.04■□□□□ 0.48
KCNA3P22001 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
KCNA3P22001 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KCNA3P22001 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC18.04■□□□□ 0.48
KCNA3P22001 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
KCNA3P22001 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KCNA3P22001 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KCNA3P22001 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KCNA3P22001 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KCNA3P22001 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KCNA3P22001 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KCNA3P22001 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KCNA3P22001 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KCNA3P22001 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.03■□□□□ 0.48
KCNA3P22001 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KCNA3P22001 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
KCNA3P22001 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
KCNA3P22001 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
KCNA3P22001 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
KCNA3P22001 NME4-203ENST00000397722 1232 ntTSL 2 BASIC18.03■□□□□ 0.48
KCNA3P22001 AC018638.5-201ENST00000450885 754 ntBASIC18.03■□□□□ 0.48
KCNA3P22001 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC18.03■□□□□ 0.48
KCNA3P22001 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC18.03■□□□□ 0.48
KCNA3P22001 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms