Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC005730.2-201ENST00000564549 1184 ntBASIC17.43■□□□□ 0.38
ERCC3P19447 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.43■□□□□ 0.38
ERCC3P19447 AP001002.3-201ENST00000623482 206 ntBASIC17.43■□□□□ 0.38
ERCC3P19447 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.43■□□□□ 0.38
ERCC3P19447 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
ERCC3P19447 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ERCC3P19447 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC3P19447 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC3P19447 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC3P19447 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC3P19447 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC3P19447 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC3P19447 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.43■□□□□ 0.38
ERCC3P19447 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.43■□□□□ 0.38
ERCC3P19447 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
ERCC3P19447 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
ERCC3P19447 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC3P19447 AC055811.4-201ENST00000624039 1754 ntBASIC17.43■□□□□ 0.38
ERCC3P19447 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
ERCC3P19447 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC3P19447 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.42■□□□□ 0.38
ERCC3P19447 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.42■□□□□ 0.38
ERCC3P19447 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC3P19447 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
ERCC3P19447 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC3P19447 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC3P19447 AC091951.1-201ENST00000512854 2465 ntBASIC17.42■□□□□ 0.38
ERCC3P19447 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC3P19447 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC3P19447 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC3P19447 AC020658.6-201ENST00000623564 1870 ntBASIC17.42■□□□□ 0.38
ERCC3P19447 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC3P19447 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC3P19447 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC3P19447 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC3P19447 ELK2AP-201ENST00000392510 1007 ntBASIC17.42■□□□□ 0.38
ERCC3P19447 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.42■□□□□ 0.38
ERCC3P19447 CHMP1AP1-201ENST00000445563 662 ntBASIC17.42■□□□□ 0.38
ERCC3P19447 EIF4HP1-201ENST00000453115 687 ntBASIC17.42■□□□□ 0.38
ERCC3P19447 SERPINA13P-202ENST00000478994 924 ntBASIC17.42■□□□□ 0.38
ERCC3P19447 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
ERCC3P19447 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.42■□□□□ 0.38
ERCC3P19447 AC105129.2-201ENST00000559536 390 ntBASIC17.42■□□□□ 0.38
ERCC3P19447 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.42■□□□□ 0.38
ERCC3P19447 AC004466.1-201ENST00000599515 1080 ntBASIC17.42■□□□□ 0.38
ERCC3P19447 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.42■□□□□ 0.38
ERCC3P19447 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.42■□□□□ 0.38
ERCC3P19447 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC3P19447 AL603764.1-201ENST00000636452 321 ntBASIC17.42■□□□□ 0.38
ERCC3P19447 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC3P19447 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC3P19447 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ERCC3P19447 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC3P19447 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.42■□□□□ 0.38
ERCC3P19447 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.42■□□□□ 0.38
ERCC3P19447 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.42■□□□□ 0.38
ERCC3P19447 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ERCC3P19447 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.42■□□□□ 0.38
ERCC3P19447 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC3P19447 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.42■□□□□ 0.38
ERCC3P19447 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC3P19447 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ERCC3P19447 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC3P19447 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC3P19447 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC3P19447 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC3P19447 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.41■□□□□ 0.38
ERCC3P19447 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
ERCC3P19447 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC3P19447 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.41■□□□□ 0.38
ERCC3P19447 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ERCC3P19447 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC3P19447 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC3P19447 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ERCC3P19447 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC3P19447 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC3P19447 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC3P19447 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.41■□□□□ 0.38
ERCC3P19447 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ERCC3P19447 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC3P19447 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC3P19447 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.41■□□□□ 0.38
ERCC3P19447 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.41■□□□□ 0.38
ERCC3P19447 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.41■□□□□ 0.38
ERCC3P19447 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.41■□□□□ 0.38
ERCC3P19447 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.41■□□□□ 0.38
ERCC3P19447 AC100850.1-201ENST00000506768 649 ntBASIC17.41■□□□□ 0.38
ERCC3P19447 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC3P19447 AC079328.1-201ENST00000560358 952 ntBASIC17.41■□□□□ 0.38
ERCC3P19447 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.41■□□□□ 0.38
ERCC3P19447 AC138649.2-201ENST00000615886 705 ntBASIC17.41■□□□□ 0.38
ERCC3P19447 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC3P19447 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ERCC3P19447 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC3P19447 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.41■□□□□ 0.38
ERCC3P19447 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC3P19447 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC3P19447 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC3P19447 CLUHP2-201ENST00000426660 1303 ntBASIC17.41■□□□□ 0.38
ERCC3P19447 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms