Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CDH1P12830 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CDH1P12830 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH1P12830 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
CDH1P12830 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
CDH1P12830 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.72□□□□□ -0.05
CDH1P12830 SBF1P1-201ENST00000444527 5631 ntBASIC14.72□□□□□ -0.05
CDH1P12830 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.72□□□□□ -0.05
CDH1P12830 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDH1P12830 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH1P12830 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
CDH1P12830 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
CDH1P12830 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH1P12830 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH1P12830 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH1P12830 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH1P12830 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH1P12830 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.71□□□□□ -0.05
CDH1P12830 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
CDH1P12830 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 BX640514.1-201ENST00000583223 1918 ntBASIC14.71□□□□□ -0.05
CDH1P12830 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.71□□□□□ -0.05
CDH1P12830 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CDH1P12830 AL645937.2-201ENST00000396808 931 ntBASIC14.71□□□□□ -0.05
CDH1P12830 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.71□□□□□ -0.05
CDH1P12830 NUS1P3-201ENST00000423502 862 ntBASIC14.71□□□□□ -0.05
CDH1P12830 HLA-K-203ENST00000430151 1046 ntBASIC14.71□□□□□ -0.05
CDH1P12830 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CDH1P12830 AP005018.1-201ENST00000525475 301 ntBASIC14.71□□□□□ -0.05
CDH1P12830 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.71□□□□□ -0.05
CDH1P12830 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH1P12830 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CDH1P12830 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.71□□□□□ -0.05
CDH1P12830 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CDH1P12830 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.71□□□□□ -0.05
CDH1P12830 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.71□□□□□ -0.05
CDH1P12830 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.71□□□□□ -0.05
CDH1P12830 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH1P12830 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDH1P12830 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CDH1P12830 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CDH1P12830 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.71□□□□□ -0.05
CDH1P12830 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CDH1P12830 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDH1P12830 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDH1P12830 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.71□□□□□ -0.06
CDH1P12830 LILRP1-201ENST00000444199 1370 ntBASIC14.71□□□□□ -0.06
CDH1P12830 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDH1P12830 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
CDH1P12830 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.71□□□□□ -0.06
CDH1P12830 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.71□□□□□ -0.06
CDH1P12830 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CDH1P12830 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
CDH1P12830 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CDH1P12830 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH1P12830 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.7□□□□□ -0.06
CDH1P12830 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CDH1P12830 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH1P12830 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH1P12830 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH1P12830 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH1P12830 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH1P12830 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH1P12830 AC005840.4-201ENST00000541242 2494 ntBASIC14.7□□□□□ -0.06
CDH1P12830 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH1P12830 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH1P12830 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH1P12830 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms