Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 BX284668.4-201ENST00000453917 508 ntBASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 AP003171.2-201ENST00000528208 925 ntBASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 AC136621.1-201ENST00000624017 2304 ntBASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB40ALP0C0E4 KRT8P4-201ENST00000509735 1454 ntBASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 AC007663.3-201ENST00000609632 465 ntBASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 AP002414.2-201ENST00000591780 3365 ntBASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RAB40ALP0C0E4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 PCDHA3-202ENST00000532566 4594 ntBASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RAB40ALP0C0E4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms