Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FREM3P0C091 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM3P0C091 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM3P0C091 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM3P0C091 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM3P0C091 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM3P0C091 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
FREM3P0C091 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM3P0C091 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
FREM3P0C091 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FREM3P0C091 FAM8A2P-201ENST00000528813 1142 ntBASIC13.65□□□□□ -0.22
FREM3P0C091 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
FREM3P0C091 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
FREM3P0C091 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.65□□□□□ -0.22
FREM3P0C091 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.65□□□□□ -0.22
FREM3P0C091 AC009486.1-201ENST00000569860 813 ntBASIC13.65□□□□□ -0.22
FREM3P0C091 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.65□□□□□ -0.22
FREM3P0C091 AL358472.3-201ENST00000608147 415 ntBASIC13.65□□□□□ -0.22
FREM3P0C091 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FREM3P0C091 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.65□□□□□ -0.22
FREM3P0C091 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
FREM3P0C091 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM3P0C091 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM3P0C091 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.65□□□□□ -0.22
FREM3P0C091 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM3P0C091 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
FREM3P0C091 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FREM3P0C091 SNX18-202ENST00000343017 3140 ntBASIC13.65□□□□□ -0.22
FREM3P0C091 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM3P0C091 AC023908.3-201ENST00000564211 3047 ntBASIC13.65□□□□□ -0.22
FREM3P0C091 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
FREM3P0C091 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM3P0C091 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.65□□□□□ -0.22
FREM3P0C091 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
FREM3P0C091 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
FREM3P0C091 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
FREM3P0C091 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.65□□□□□ -0.23
FREM3P0C091 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
FREM3P0C091 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.64□□□□□ -0.23
FREM3P0C091 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FREM3P0C091 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
FREM3P0C091 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.64□□□□□ -0.23
FREM3P0C091 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
FREM3P0C091 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.64□□□□□ -0.23
FREM3P0C091 AC006033.1-201ENST00000440505 426 ntBASIC13.64□□□□□ -0.23
FREM3P0C091 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.64□□□□□ -0.23
FREM3P0C091 MESTP3-201ENST00000503460 968 ntBASIC13.64□□□□□ -0.23
FREM3P0C091 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.64□□□□□ -0.23
FREM3P0C091 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.64□□□□□ -0.23
FREM3P0C091 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.64□□□□□ -0.23
FREM3P0C091 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.64□□□□□ -0.23
FREM3P0C091 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.64□□□□□ -0.23
FREM3P0C091 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
FREM3P0C091 AL603764.1-201ENST00000636452 321 ntBASIC13.64□□□□□ -0.23
FREM3P0C091 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
FREM3P0C091 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
FREM3P0C091 FKBP4P6-201ENST00000457486 1332 ntBASIC13.64□□□□□ -0.23
FREM3P0C091 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.64□□□□□ -0.23
FREM3P0C091 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FREM3P0C091 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.64□□□□□ -0.23
FREM3P0C091 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FREM3P0C091 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FREM3P0C091 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
FREM3P0C091 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FREM3P0C091 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FREM3P0C091 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
FREM3P0C091 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FREM3P0C091 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
FREM3P0C091 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.64□□□□□ -0.23
FREM3P0C091 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
FREM3P0C091 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.64□□□□□ -0.23
FREM3P0C091 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FREM3P0C091 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
FREM3P0C091 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.64□□□□□ -0.23
FREM3P0C091 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
FREM3P0C091 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
FREM3P0C091 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
FREM3P0C091 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FREM3P0C091 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
FREM3P0C091 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FREM3P0C091 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FREM3P0C091 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
FREM3P0C091 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.64□□□□□ -0.23
FREM3P0C091 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
FREM3P0C091 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.64□□□□□ -0.23
FREM3P0C091 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
FREM3P0C091 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
FREM3P0C091 YBX1P6-201ENST00000442962 1002 ntBASIC13.64□□□□□ -0.23
FREM3P0C091 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.64□□□□□ -0.23
FREM3P0C091 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
FREM3P0C091 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.64□□□□□ -0.23
FREM3P0C091 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.64□□□□□ -0.23
FREM3P0C091 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
FREM3P0C091 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.64□□□□□ -0.23
FREM3P0C091 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
FREM3P0C091 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.64□□□□□ -0.23
FREM3P0C091 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
FREM3P0C091 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.64□□□□□ -0.23
FREM3P0C091 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
FREM3P0C091 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms