Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOEP02649 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
APOEP02649 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.82■□□□□ 0.12
APOEP02649 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOEP02649 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOEP02649 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOEP02649 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOEP02649 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.82■□□□□ 0.12
APOEP02649 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
APOEP02649 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
APOEP02649 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
APOEP02649 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.82■□□□□ 0.12
APOEP02649 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.82■□□□□ 0.12
APOEP02649 AC112492.5-201ENST00000421897 457 ntBASIC15.82■□□□□ 0.12
APOEP02649 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.82■□□□□ 0.12
APOEP02649 AC022616.1-201ENST00000518688 554 ntBASIC15.82■□□□□ 0.12
APOEP02649 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.82■□□□□ 0.12
APOEP02649 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
APOEP02649 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
APOEP02649 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOEP02649 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.82■□□□□ 0.12
APOEP02649 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.82■□□□□ 0.12
APOEP02649 AL360270.3-201ENST00000609118 1348 ntBASIC15.82■□□□□ 0.12
APOEP02649 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APOEP02649 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.82■□□□□ 0.12
APOEP02649 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.82■□□□□ 0.12
APOEP02649 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOEP02649 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.82■□□□□ 0.12
APOEP02649 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOEP02649 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOEP02649 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
APOEP02649 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOEP02649 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
APOEP02649 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOEP02649 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOEP02649 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOEP02649 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOEP02649 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOEP02649 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOEP02649 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOEP02649 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
APOEP02649 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOEP02649 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOEP02649 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOEP02649 OR8S1-201ENST00000310194 1080 ntBASIC15.81■□□□□ 0.12
APOEP02649 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOEP02649 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APOEP02649 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOEP02649 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APOEP02649 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOEP02649 GK-202ENST00000378941 458 ntTSL 3 BASIC15.81■□□□□ 0.12
APOEP02649 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APOEP02649 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.81■□□□□ 0.12
APOEP02649 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.81■□□□□ 0.12
APOEP02649 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOEP02649 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
APOEP02649 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOEP02649 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.81■□□□□ 0.12
APOEP02649 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.81■□□□□ 0.12
APOEP02649 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.81■□□□□ 0.12
APOEP02649 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
APOEP02649 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.81■□□□□ 0.12
APOEP02649 HILS1-202ENST00000545329 423 ntBASIC15.81■□□□□ 0.12
APOEP02649 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
APOEP02649 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.81■□□□□ 0.12
APOEP02649 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
APOEP02649 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
APOEP02649 AC145423.3-201ENST00000615987 467 ntBASIC15.81■□□□□ 0.12
APOEP02649 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOEP02649 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
APOEP02649 AL390755.1-201ENST00000623716 2027 ntBASIC15.81■□□□□ 0.12
APOEP02649 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.81■□□□□ 0.12
APOEP02649 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
APOEP02649 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APOEP02649 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOEP02649 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APOEP02649 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
APOEP02649 AJ011931.1-201ENST00000618749 2492 ntBASIC15.8■□□□□ 0.12
APOEP02649 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.8■□□□□ 0.12
APOEP02649 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.8■□□□□ 0.12
APOEP02649 REXO1L5P-201ENST00000622260 2098 ntBASIC15.8■□□□□ 0.12
APOEP02649 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.8■□□□□ 0.12
APOEP02649 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
APOEP02649 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
APOEP02649 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
APOEP02649 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.8■□□□□ 0.12
APOEP02649 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
APOEP02649 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.8■□□□□ 0.12
APOEP02649 AC092933.1-201ENST00000393644 945 ntBASIC15.8■□□□□ 0.12
APOEP02649 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
APOEP02649 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms