Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 AC005840.4-201ENST00000541242 2494 ntBASIC13.65□□□□□ -0.22
PPP1R3DO95685 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PPP1R3DO95685 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PPP1R3DO95685 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PPP1R3DO95685 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PPP1R3DO95685 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PPP1R3DO95685 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PPP1R3DO95685 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 FAM86LP-201ENST00000478302 853 ntBASIC13.65□□□□□ -0.22
PPP1R3DO95685 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PPP1R3DO95685 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 AC135586.1-201ENST00000539323 574 ntBASIC13.65□□□□□ -0.22
PPP1R3DO95685 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 AC036164.1-201ENST00000570544 333 ntBASIC13.65□□□□□ -0.22
PPP1R3DO95685 SRD5A3P1-201ENST00000603021 949 ntBASIC13.65□□□□□ -0.22
PPP1R3DO95685 AC008738.7-201ENST00000609744 511 ntBASIC13.65□□□□□ -0.22
PPP1R3DO95685 AC023090.2-201ENST00000625182 2110 ntBASIC13.65□□□□□ -0.22
PPP1R3DO95685 AC004840.1-201ENST00000636359 365 ntBASIC13.65□□□□□ -0.22
PPP1R3DO95685 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PPP1R3DO95685 AC006504.5-208ENST00000588784 2401 ntBASIC13.65□□□□□ -0.22
PPP1R3DO95685 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
PPP1R3DO95685 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
PPP1R3DO95685 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PPP1R3DO95685 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PPP1R3DO95685 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PPP1R3DO95685 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PPP1R3DO95685 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
PPP1R3DO95685 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PPP1R3DO95685 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
PPP1R3DO95685 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
PPP1R3DO95685 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PPP1R3DO95685 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PPP1R3DO95685 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PPP1R3DO95685 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.64□□□□□ -0.23
PPP1R3DO95685 DRD5P1-201ENST00000456605 1438 ntBASIC13.64□□□□□ -0.23
PPP1R3DO95685 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.64□□□□□ -0.23
PPP1R3DO95685 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
PPP1R3DO95685 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PPP1R3DO95685 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PPP1R3DO95685 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PPP1R3DO95685 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
PPP1R3DO95685 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PPP1R3DO95685 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PPP1R3DO95685 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PPP1R3DO95685 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PPP1R3DO95685 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PPP1R3DO95685 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PPP1R3DO95685 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
PPP1R3DO95685 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.64□□□□□ -0.23
PPP1R3DO95685 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
PPP1R3DO95685 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
PPP1R3DO95685 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.64□□□□□ -0.23
PPP1R3DO95685 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.64□□□□□ -0.23
PPP1R3DO95685 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
PPP1R3DO95685 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PPP1R3DO95685 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.64□□□□□ -0.23
PPP1R3DO95685 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PPP1R3DO95685 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PPP1R3DO95685 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PPP1R3DO95685 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.64□□□□□ -0.23
PPP1R3DO95685 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PPP1R3DO95685 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.64□□□□□ -0.23
PPP1R3DO95685 AL353779.1-201ENST00000434793 351 ntBASIC13.64□□□□□ -0.23
PPP1R3DO95685 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.64□□□□□ -0.23
PPP1R3DO95685 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.64□□□□□ -0.23
PPP1R3DO95685 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.64□□□□□ -0.23
PPP1R3DO95685 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.64□□□□□ -0.23
PPP1R3DO95685 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.64□□□□□ -0.23
PPP1R3DO95685 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.64□□□□□ -0.23
PPP1R3DO95685 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.64□□□□□ -0.23
PPP1R3DO95685 AL049840.4-201ENST00000602422 811 ntBASIC13.64□□□□□ -0.23
PPP1R3DO95685 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
PPP1R3DO95685 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PPP1R3DO95685 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
PPP1R3DO95685 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms