Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SNCGO76070 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SNCGO76070 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
SNCGO76070 BCAT1-201ENST00000261192 9674 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
SNCGO76070 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC10.17□□□□□ -0.78
SNCGO76070 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SNCGO76070 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
SNCGO76070 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SNCGO76070 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SNCGO76070 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SNCGO76070 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC10.17□□□□□ -0.78
SNCGO76070 PMPCAP1-201ENST00000508114 1576 ntBASIC10.17□□□□□ -0.78
SNCGO76070 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC10.17□□□□□ -0.78
SNCGO76070 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC10.17□□□□□ -0.78
SNCGO76070 AC092127.1-201ENST00000567093 3455 ntBASIC10.17□□□□□ -0.78
SNCGO76070 PKN2-203ENST00000370521 6121 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SNCGO76070 SPECC1-205ENST00000395529 4971 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SNCGO76070 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC10.17□□□□□ -0.78
SNCGO76070 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SNCGO76070 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
SNCGO76070 GTF3C1-201ENST00000356183 7018 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
SNCGO76070 FN1-207ENST00000421182 8103 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SNCGO76070 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
SNCGO76070 AP000997.2-201ENST00000564619 8400 ntBASIC10.17□□□□□ -0.78
SNCGO76070 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
SNCGO76070 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
SNCGO76070 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC10.17□□□□□ -0.78
SNCGO76070 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SNCGO76070 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC10.17□□□□□ -0.78
SNCGO76070 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC10.16□□□□□ -0.78
SNCGO76070 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 KIAA1755-201ENST00000279024 6429 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
SNCGO76070 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC10.16□□□□□ -0.78
SNCGO76070 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC10.16□□□□□ -0.78
SNCGO76070 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 MADD-206ENST00000402192 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC10.16□□□□□ -0.78
SNCGO76070 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC10.16□□□□□ -0.78
SNCGO76070 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 NRXN3-217ENST00000634499 6069 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
SNCGO76070 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 XRRA1-201ENST00000321448 4695 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
SNCGO76070 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 AL590787.1-201ENST00000568856 1315 ntBASIC10.16□□□□□ -0.78
SNCGO76070 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC10.16□□□□□ -0.78
SNCGO76070 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
SNCGO76070 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 L3MBTL3-207ENST00000529410 4518 ntAPPRIS P4 TSL 5 BASIC10.16□□□□□ -0.78
SNCGO76070 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 NRAP-202ENST00000360478 5426 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 SPDYE21P-201ENST00000413323 827 ntBASIC10.16□□□□□ -0.78
SNCGO76070 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC10.16□□□□□ -0.78
SNCGO76070 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC10.16□□□□□ -0.78
SNCGO76070 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC10.16□□□□□ -0.78
SNCGO76070 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC10.16□□□□□ -0.78
SNCGO76070 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
SNCGO76070 AL023973.1-201ENST00000624619 620 ntBASIC10.16□□□□□ -0.78
SNCGO76070 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC10.16□□□□□ -0.78
SNCGO76070 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC10.16□□□□□ -0.78
SNCGO76070 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC10.16□□□□□ -0.78
SNCGO76070 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC10.16□□□□□ -0.78
SNCGO76070 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC10.16□□□□□ -0.78
SNCGO76070 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC10.16□□□□□ -0.78
SNCGO76070 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
SNCGO76070 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC10.16□□□□□ -0.78
SNCGO76070 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SNCGO76070 NCF1C-201ENST00000438382 1427 ntBASIC10.16□□□□□ -0.78
SNCGO76070 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
SNCGO76070 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
SNCGO76070 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
SNCGO76070 AL357140.3-201ENST00000639753 1983 ntBASIC10.15□□□□□ -0.78
SNCGO76070 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SNCGO76070 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SNCGO76070 FN1-204ENST00000356005 7846 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SNCGO76070 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SNCGO76070 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC10.15□□□□□ -0.78
SNCGO76070 AC022400.8-201ENST00000623453 3599 ntBASIC10.15□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms