Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
SSSCA1O60232 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
SSSCA1O60232 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.34□□□□□ -0.43
SSSCA1O60232 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SSSCA1O60232 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.34□□□□□ -0.43
SSSCA1O60232 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.34□□□□□ -0.43
SSSCA1O60232 FO393414.2-201ENST00000405153 598 ntBASIC12.34□□□□□ -0.43
SSSCA1O60232 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.34□□□□□ -0.43
SSSCA1O60232 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.34□□□□□ -0.43
SSSCA1O60232 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
SSSCA1O60232 SPCS2P4-201ENST00000436160 681 ntBASIC12.34□□□□□ -0.43
SSSCA1O60232 SPDYE11-202ENST00000450699 704 ntBASIC12.34□□□□□ -0.43
SSSCA1O60232 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.34□□□□□ -0.43
SSSCA1O60232 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.34□□□□□ -0.43
SSSCA1O60232 SLED1-202ENST00000512051 380 ntBASIC12.34□□□□□ -0.43
SSSCA1O60232 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.34□□□□□ -0.43
SSSCA1O60232 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.34□□□□□ -0.43
SSSCA1O60232 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.34□□□□□ -0.43
SSSCA1O60232 AC106730.1-201ENST00000566722 1090 ntBASIC12.34□□□□□ -0.43
SSSCA1O60232 SPDYE9P-201ENST00000570642 692 ntBASIC12.34□□□□□ -0.43
SSSCA1O60232 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SSSCA1O60232 SPDYE10P-202ENST00000612005 668 ntBASIC12.34□□□□□ -0.43
SSSCA1O60232 SPDYE8P-202ENST00000612377 668 ntBASIC12.34□□□□□ -0.43
SSSCA1O60232 AC091812.2-201ENST00000619081 385 ntBASIC12.34□□□□□ -0.43
SSSCA1O60232 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.34□□□□□ -0.43
SSSCA1O60232 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SSSCA1O60232 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.34□□□□□ -0.43
SSSCA1O60232 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.34□□□□□ -0.43
SSSCA1O60232 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SSSCA1O60232 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
SSSCA1O60232 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 DGCR9-201ENST00000609630 2415 ntBASIC12.33□□□□□ -0.43
SSSCA1O60232 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SSSCA1O60232 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.43
SSSCA1O60232 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
SSSCA1O60232 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
SSSCA1O60232 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.43
SSSCA1O60232 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.33□□□□□ -0.44
SSSCA1O60232 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 UXT-AS1-201ENST00000590504 1525 ntBASIC12.33□□□□□ -0.44
SSSCA1O60232 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 AC099521.3-201ENST00000624251 2938 ntBASIC12.33□□□□□ -0.44
SSSCA1O60232 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.33□□□□□ -0.44
SSSCA1O60232 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.33□□□□□ -0.44
SSSCA1O60232 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 PPT1-213ENST00000641319 2388 ntBASIC12.33□□□□□ -0.44
SSSCA1O60232 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.33□□□□□ -0.44
SSSCA1O60232 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.33□□□□□ -0.44
SSSCA1O60232 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
SSSCA1O60232 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
SSSCA1O60232 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SSSCA1O60232 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.33□□□□□ -0.44
SSSCA1O60232 AL353705.2-201ENST00000428243 662 ntBASIC12.33□□□□□ -0.44
SSSCA1O60232 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.33□□□□□ -0.44
SSSCA1O60232 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SSSCA1O60232 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.33□□□□□ -0.44
SSSCA1O60232 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.33□□□□□ -0.44
SSSCA1O60232 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.33□□□□□ -0.44
SSSCA1O60232 RARRES2P9-201ENST00000565168 469 ntBASIC12.33□□□□□ -0.44
SSSCA1O60232 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.33□□□□□ -0.44
SSSCA1O60232 AP001005.1-201ENST00000571755 1248 ntBASIC12.33□□□□□ -0.44
SSSCA1O60232 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SSSCA1O60232 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.33□□□□□ -0.44
SSSCA1O60232 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 AL645728.2-202ENST00000641679 227 ntBASIC12.33□□□□□ -0.44
SSSCA1O60232 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 KRT8P22-201ENST00000562317 1415 ntBASIC12.33□□□□□ -0.44
SSSCA1O60232 AC104109.2-201ENST00000602919 1418 ntBASIC12.33□□□□□ -0.44
SSSCA1O60232 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SSSCA1O60232 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms