Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.07■□□□□ 0.64
KCNQ3O43525 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KCNQ3O43525 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
KCNQ3O43525 PARVG-202ENST00000415224 999 ntTSL 2 BASIC19.07■□□□□ 0.64
KCNQ3O43525 FAM58BP-201ENST00000439056 645 ntBASIC19.07■□□□□ 0.64
KCNQ3O43525 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC19.07■□□□□ 0.64
KCNQ3O43525 AC006122.1-201ENST00000493323 440 ntBASIC19.07■□□□□ 0.64
KCNQ3O43525 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KCNQ3O43525 AC116345.2-201ENST00000512837 523 ntBASIC19.07■□□□□ 0.64
KCNQ3O43525 FADS2-212ENST00000522639 360 ntTSL 5 BASIC19.07■□□□□ 0.64
KCNQ3O43525 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
KCNQ3O43525 FADS2-215ENST00000574708 385 ntTSL 3 BASIC19.07■□□□□ 0.64
KCNQ3O43525 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC19.07■□□□□ 0.64
KCNQ3O43525 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC19.07■□□□□ 0.64
KCNQ3O43525 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC19.07■□□□□ 0.64
KCNQ3O43525 MEG3_2.1-201ENST00000611456 105 ntBASIC19.07■□□□□ 0.64
KCNQ3O43525 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC19.07■□□□□ 0.64
KCNQ3O43525 AL136295.7-201ENST00000619226 1200 ntBASIC19.07■□□□□ 0.64
KCNQ3O43525 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KCNQ3O43525 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
KCNQ3O43525 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
KCNQ3O43525 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
KCNQ3O43525 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KCNQ3O43525 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KCNQ3O43525 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KCNQ3O43525 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC19.07■□□□□ 0.64
KCNQ3O43525 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KCNQ3O43525 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KCNQ3O43525 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC19.07■□□□□ 0.64
KCNQ3O43525 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KCNQ3O43525 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KCNQ3O43525 MECR-202ENST00000373791 2416 ntTSL 2 BASIC19.06■□□□□ 0.64
KCNQ3O43525 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
KCNQ3O43525 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNQ3O43525 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNQ3O43525 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNQ3O43525 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNQ3O43525 FAS-202ENST00000352159 1722 ntTSL 5 BASIC19.06■□□□□ 0.64
KCNQ3O43525 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KCNQ3O43525 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC19.06■□□□□ 0.64
KCNQ3O43525 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNQ3O43525 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
KCNQ3O43525 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNQ3O43525 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNQ3O43525 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNQ3O43525 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KCNQ3O43525 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC19.06■□□□□ 0.64
KCNQ3O43525 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNQ3O43525 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KCNQ3O43525 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC19.06■□□□□ 0.64
KCNQ3O43525 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC19.06■□□□□ 0.64
KCNQ3O43525 SUPT4H1P2-201ENST00000501248 353 ntBASIC19.06■□□□□ 0.64
KCNQ3O43525 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNQ3O43525 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC19.06■□□□□ 0.64
KCNQ3O43525 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNQ3O43525 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
KCNQ3O43525 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNQ3O43525 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
KCNQ3O43525 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC19.06■□□□□ 0.64
KCNQ3O43525 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KCNQ3O43525 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KCNQ3O43525 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNQ3O43525 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
KCNQ3O43525 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC19.06■□□□□ 0.64
KCNQ3O43525 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNQ3O43525 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNQ3O43525 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC19.05■□□□□ 0.64
KCNQ3O43525 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KCNQ3O43525 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KCNQ3O43525 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KCNQ3O43525 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
KCNQ3O43525 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
KCNQ3O43525 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KCNQ3O43525 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC19.05■□□□□ 0.64
KCNQ3O43525 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KCNQ3O43525 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KCNQ3O43525 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
KCNQ3O43525 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KCNQ3O43525 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
KCNQ3O43525 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KCNQ3O43525 UFM1-202ENST00000379649 846 ntTSL 4 BASIC19.05■□□□□ 0.64
KCNQ3O43525 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC19.05■□□□□ 0.64
KCNQ3O43525 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KCNQ3O43525 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KCNQ3O43525 HINT2P1-201ENST00000419438 481 ntBASIC19.05■□□□□ 0.64
KCNQ3O43525 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC19.05■□□□□ 0.64
KCNQ3O43525 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KCNQ3O43525 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC19.05■□□□□ 0.64
KCNQ3O43525 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
KCNQ3O43525 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC19.05■□□□□ 0.64
KCNQ3O43525 MIR4706-201ENST00000582134 82 ntBASIC19.05■□□□□ 0.64
KCNQ3O43525 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC19.05■□□□□ 0.64
KCNQ3O43525 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
KCNQ3O43525 AL157813.1-201ENST00000612996 587 ntBASIC19.05■□□□□ 0.64
KCNQ3O43525 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
KCNQ3O43525 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC19.05■□□□□ 0.64
KCNQ3O43525 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KCNQ3O43525 AC006504.5-208ENST00000588784 2401 ntBASIC19.05■□□□□ 0.64
KCNQ3O43525 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
KCNQ3O43525 AC092384.3-202ENST00000564646 2873 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms