Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 TMEM14DP-201ENST00000422205 345 ntBASIC15.35■□□□□ 0.05
CAPN8A6NHC0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 AC093433.1-201ENST00000458048 571 ntBASIC15.35■□□□□ 0.05
CAPN8A6NHC0 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 AC068587.3-201ENST00000526613 355 ntBASIC15.35■□□□□ 0.05
CAPN8A6NHC0 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 TDH-203ENST00000531764 1110 ntBASIC15.35■□□□□ 0.05
CAPN8A6NHC0 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 AC015656.1-201ENST00000624209 3578 ntBASIC15.35■□□□□ 0.05
CAPN8A6NHC0 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 WASH3P-207ENST00000560956 1394 ntBASIC15.35■□□□□ 0.05
CAPN8A6NHC0 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CAPN8A6NHC0 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 AL139094.1-201ENST00000405549 1188 ntBASIC15.34■□□□□ 0.05
CAPN8A6NHC0 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 AC012441.1-201ENST00000446669 685 ntBASIC15.34■□□□□ 0.05
CAPN8A6NHC0 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 PTP4A1P2-201ENST00000546033 454 ntBASIC15.34■□□□□ 0.05
CAPN8A6NHC0 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 AC008735.3-201ENST00000596646 500 ntBASIC15.34■□□□□ 0.05
CAPN8A6NHC0 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 AC041040.2-201ENST00000622926 2899 ntBASIC15.34■□□□□ 0.05
CAPN8A6NHC0 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 AC020907.1-201ENST00000616460 1350 ntBASIC15.34■□□□□ 0.05
CAPN8A6NHC0 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 AP000845.1-201ENST00000581677 2131 ntBASIC15.34■□□□□ 0.05
CAPN8A6NHC0 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CAPN8A6NHC0 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.33■□□□□ 0.05
CAPN8A6NHC0 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CAPN8A6NHC0 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CAPN8A6NHC0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.33■□□□□ 0.05
CAPN8A6NHC0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
CAPN8A6NHC0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CAPN8A6NHC0 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms