Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAV18A0A075B6X5 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 AC074338.1-201ENST00000416825 156 ntBASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 KRT18P64-201ENST00000434946 1219 ntBASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 AL662844.1-201ENST00000546340 181 ntBASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 BANF1P1-201ENST00000553684 263 ntBASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 AC018665.1-201ENST00000622927 1362 ntBASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV18A0A075B6X5 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 RPL13AP23-201ENST00000480739 586 ntBASIC13□□□□□ -0.33
TRAV18A0A075B6X5 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 GATB-205ENST00000508611 605 ntTSL 2 BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13□□□□□ -0.33
TRAV18A0A075B6X5 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms