Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC22■■□□□ 1.11
CDC42BPBQ9Y5S2 AL591471.1-201ENST00000621855 229 ntBASIC22■■□□□ 1.11
CDC42BPBQ9Y5S2 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPBQ9Y5S2 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPBQ9Y5S2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22■■□□□ 1.11
CDC42BPBQ9Y5S2 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPBQ9Y5S2 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPBQ9Y5S2 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPBQ9Y5S2 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC22■■□□□ 1.11
CDC42BPBQ9Y5S2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC22■■□□□ 1.11
CDC42BPBQ9Y5S2 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPBQ9Y5S2 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPBQ9Y5S2 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPBQ9Y5S2 LCK-206ENST00000373564 2137 ntTSL 5 BASIC22■■□□□ 1.11
CDC42BPBQ9Y5S2 AC024293.1-201ENST00000467930 498 ntBASIC22■■□□□ 1.11
CDC42BPBQ9Y5S2 AC093826.1-201ENST00000508655 993 ntBASIC22■■□□□ 1.11
CDC42BPBQ9Y5S2 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC22■■□□□ 1.11
CDC42BPBQ9Y5S2 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 AC006372.4-201ENST00000624122 1543 ntBASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 HCG27-204ENST00000424675 895 ntTSL 3 BASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 OR2A1-AS1-210ENST00000496968 531 ntBASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 OR5BD1P-201ENST00000532527 817 ntBASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 AC010976.2-201ENST00000609697 852 ntBASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42BPBQ9Y5S2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC21.98■■□□□ 1.11
CDC42BPBQ9Y5S2 TEKT4P2-202ENST00000559466 1312 ntBASIC21.98■■□□□ 1.11
CDC42BPBQ9Y5S2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42BPBQ9Y5S2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC21.98■■□□□ 1.11
CDC42BPBQ9Y5S2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CDC42BPBQ9Y5S2 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42BPBQ9Y5S2 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC21.98■■□□□ 1.11
CDC42BPBQ9Y5S2 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC21.98■■□□□ 1.11
CDC42BPBQ9Y5S2 CSNK1G2P1-201ENST00000442675 955 ntBASIC21.98■■□□□ 1.11
CDC42BPBQ9Y5S2 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42BPBQ9Y5S2 RN7SL596P-201ENST00000582123 288 ntBASIC21.98■■□□□ 1.11
CDC42BPBQ9Y5S2 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC21.98■■□□□ 1.11
CDC42BPBQ9Y5S2 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
CDC42BPBQ9Y5S2 HELLS-212ENST00000630929 400 ntTSL 5 BASIC21.98■■□□□ 1.11
CDC42BPBQ9Y5S2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42BPBQ9Y5S2 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC21.98■■□□□ 1.11
CDC42BPBQ9Y5S2 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42BPBQ9Y5S2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC21.98■■□□□ 1.11
CDC42BPBQ9Y5S2 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42BPBQ9Y5S2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42BPBQ9Y5S2 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42BPBQ9Y5S2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 TRMT112P3-201ENST00000580149 358 ntBASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 THY1-209ENST00000580275 578 ntTSL 3 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 KRT17P4-201ENST00000429445 819 ntBASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 AC098934.1-203ENST00000442868 1262 ntBASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 KRT8P2-201ENST00000556193 944 ntBASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 USB1-205ENST00000561743 1135 ntTSL 3 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 AL451007.2-201ENST00000632004 563 ntBASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC21.97■■□□□ 1.11
CDC42BPBQ9Y5S2 AC002472.4-201ENST00000641915 272 ntBASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms