Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 MIR346-201ENST00000362234 95 ntBASIC14.29□□□□□ -0.12
AP4S1Q9Y587 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 AC074386.1-202ENST00000463561 864 ntBASIC14.29□□□□□ -0.12
AP4S1Q9Y587 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 TCAM1P-207ENST00000485295 1537 ntBASIC14.29□□□□□ -0.12
AP4S1Q9Y587 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.29□□□□□ -0.12
AP4S1Q9Y587 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 AC131212.3-201ENST00000624087 4219 ntBASIC14.28□□□□□ -0.12
AP4S1Q9Y587 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 AL133267.1-201ENST00000398220 340 ntBASIC14.28□□□□□ -0.12
AP4S1Q9Y587 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 HIST3H2BA-201ENST00000436555 524 ntBASIC14.28□□□□□ -0.12
AP4S1Q9Y587 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 RNA5SP415-201ENST00000517246 115 ntBASIC14.28□□□□□ -0.12
AP4S1Q9Y587 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 AL135744.1-201ENST00000565098 629 ntBASIC14.28□□□□□ -0.12
AP4S1Q9Y587 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 AC018845.2-201ENST00000568326 409 ntBASIC14.28□□□□□ -0.12
AP4S1Q9Y587 AC012617.1-204ENST00000586340 2305 ntBASIC14.28□□□□□ -0.12
AP4S1Q9Y587 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 AC073548.1-201ENST00000624088 1882 ntBASIC14.28□□□□□ -0.12
AP4S1Q9Y587 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP4S1Q9Y587 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC14.27□□□□□ -0.12
AP4S1Q9Y587 AC023794.5-201ENST00000564380 2157 ntBASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms