Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 KRT8P1-201ENST00000557533 1207 ntBASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHANK2Q9UPX8 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 AC018442.1-201ENST00000421439 2061 ntBASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 AL139008.1-201ENST00000437894 228 ntBASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 AL157792.1-201ENST00000488281 530 ntBASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 ELP5-212ENST00000574255 671 ntTSL 2 BASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 MIR4649-201ENST00000582839 64 ntBASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 SIGLEC18P-201ENST00000602271 909 ntBASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHANK2Q9UPX8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHANK2Q9UPX8 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC21.78■■□□□ 1.08
SHANK2Q9UPX8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SHANK2Q9UPX8 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHANK2Q9UPX8 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHANK2Q9UPX8 MIR645-201ENST00000385283 94 ntBASIC21.78■■□□□ 1.08
SHANK2Q9UPX8 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC21.78■■□□□ 1.08
SHANK2Q9UPX8 AL627422.1-201ENST00000434104 580 ntBASIC21.78■■□□□ 1.08
SHANK2Q9UPX8 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC21.78■■□□□ 1.08
SHANK2Q9UPX8 AC007326.1-201ENST00000604539 458 ntBASIC21.78■■□□□ 1.08
SHANK2Q9UPX8 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC21.78■■□□□ 1.08
SHANK2Q9UPX8 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC21.78■■□□□ 1.08
SHANK2Q9UPX8 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHANK2Q9UPX8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SHANK2Q9UPX8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHANK2Q9UPX8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHANK2Q9UPX8 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHANK2Q9UPX8 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC21.78■■□□□ 1.08
SHANK2Q9UPX8 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC21.77■■□□□ 1.08
SHANK2Q9UPX8 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC21.77■■□□□ 1.08
SHANK2Q9UPX8 DUX4L50-201ENST00000455245 715 ntBASIC21.77■■□□□ 1.08
SHANK2Q9UPX8 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SHANK2Q9UPX8 AP001527.2-201ENST00000614441 631 ntBASIC21.77■■□□□ 1.08
SHANK2Q9UPX8 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SHANK2Q9UPX8 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC21.77■■□□□ 1.08
SHANK2Q9UPX8 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
SHANK2Q9UPX8 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHANK2Q9UPX8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC21.77■■□□□ 1.08
SHANK2Q9UPX8 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SHANK2Q9UPX8 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
SHANK2Q9UPX8 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHANK2Q9UPX8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.77■■□□□ 1.08
SHANK2Q9UPX8 AC105917.1-201ENST00000506637 2539 ntBASIC21.77■■□□□ 1.08
SHANK2Q9UPX8 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
SHANK2Q9UPX8 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
SHANK2Q9UPX8 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SHANK2Q9UPX8 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SHANK2Q9UPX8 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC21.77■■□□□ 1.07
SHANK2Q9UPX8 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SHANK2Q9UPX8 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
SHANK2Q9UPX8 AL022344.2-201ENST00000568976 968 ntBASIC21.77■■□□□ 1.07
SHANK2Q9UPX8 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
SHANK2Q9UPX8 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC21.77■■□□□ 1.07
SHANK2Q9UPX8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SHANK2Q9UPX8 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 ZEB1-AS1-208ENST00000607166 2503 ntBASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SHANK2Q9UPX8 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms