Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.64■□□□□ 0.09
AP4E1Q9UPM8 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.64■□□□□ 0.09
AP4E1Q9UPM8 AC145423.3-201ENST00000615987 467 ntBASIC15.64■□□□□ 0.09
AP4E1Q9UPM8 AL358472.5-202ENST00000641448 1267 ntBASIC15.64■□□□□ 0.09
AP4E1Q9UPM8 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4E1Q9UPM8 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4E1Q9UPM8 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4E1Q9UPM8 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.64■□□□□ 0.09
AP4E1Q9UPM8 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
AP4E1Q9UPM8 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.64■□□□□ 0.09
AP4E1Q9UPM8 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
AP4E1Q9UPM8 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
AP4E1Q9UPM8 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
AP4E1Q9UPM8 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
AP4E1Q9UPM8 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.64■□□□□ 0.09
AP4E1Q9UPM8 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
AP4E1Q9UPM8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
AP4E1Q9UPM8 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4E1Q9UPM8 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
AP4E1Q9UPM8 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
AP4E1Q9UPM8 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 AC140479.7-201ENST00000636301 2332 ntBASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 AL512384.1-201ENST00000406683 331 ntBASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 AC106760.1-201ENST00000508690 800 ntBASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 AC004466.1-201ENST00000599515 1080 ntBASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 FAM45BP-202ENST00000592932 1624 ntBASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
AP4E1Q9UPM8 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 CU639417.3-201ENST00000624240 1404 ntBASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 AL035633.1-201ENST00000406139 838 ntBASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 TTTY23B-201ENST00000442790 549 ntBASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 AL355864.2-201ENST00000447420 863 ntBASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 AP001889.1-201ENST00000525414 633 ntBASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.62■□□□□ 0.09
AP4E1Q9UPM8 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms