Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HCN3Q9P1Z3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 REXO1L2P-201ENST00000425429 2069 ntBASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 MIR658-201ENST00000385210 100 ntBASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 MIR1909-201ENST00000411312 80 ntBASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 CTBP2P5-201ENST00000454986 1264 ntBASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 SNX18-202ENST00000343017 3140 ntBASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HCN3Q9P1Z3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 OR2I1P-210ENST00000642037 4691 ntBASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 ANKRD19P-201ENST00000338192 862 ntBASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 BOLA2P3-201ENST00000404566 256 ntBASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 AC016694.1-201ENST00000434179 700 ntBASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 EIF3FP3-201ENST00000434851 1086 ntBASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 AC022616.1-201ENST00000518688 554 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms