Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 AL132655.2-201ENST00000596276 594 ntBASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 AL662799.1-202ENST00000614205 422 ntBASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 AC007431.3-201ENST00000623221 587 ntBASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 BX539320.1-201ENST00000623759 877 ntBASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 LILRP1-201ENST00000444199 1370 ntBASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 CICP14-201ENST00000629111 2732 ntBASIC14.94□□□□□ -0.02
TRIM54Q9BYV2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 AC093525.8-201ENST00000624099 1342 ntBASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 C1QBPP1-201ENST00000400117 770 ntBASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 SOCS2P1-201ENST00000417727 557 ntBASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM54Q9BYV2 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 AL158070.2-201ENST00000623713 1621 ntBASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms