Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 AC018665.1-201ENST00000622927 1362 ntBASIC10.58□□□□□ -0.72
UPK3BQ9BT76 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 LBX2-201ENST00000341396 886 ntTSL 3 BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 AC112492.5-201ENST00000421897 457 ntBASIC10.58□□□□□ -0.72
UPK3BQ9BT76 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 KRT18P25-201ENST00000508931 1278 ntBASIC10.58□□□□□ -0.72
UPK3BQ9BT76 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 HILS1-202ENST00000545329 423 ntBASIC10.58□□□□□ -0.72
UPK3BQ9BT76 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 AP005482.1-201ENST00000563722 1273 ntBASIC10.58□□□□□ -0.72
UPK3BQ9BT76 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 BX539320.1-201ENST00000623759 877 ntBASIC10.58□□□□□ -0.72
UPK3BQ9BT76 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
UPK3BQ9BT76 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 MARS-233ENST00000628866 2583 ntTSL 5 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 MGST3-203ENST00000367885 680 ntTSL 2 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 NME2-201ENST00000393183 568 ntTSL 2 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 RPL28-204ENST00000431533 590 ntTSL 2 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 PFN2-205ENST00000461868 613 ntTSL 2 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 AC004066.1-201ENST00000502488 802 ntBASIC10.57□□□□□ -0.72
UPK3BQ9BT76 AP001889.1-201ENST00000525414 633 ntBASIC10.57□□□□□ -0.72
UPK3BQ9BT76 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 RPL28-206ENST00000558752 671 ntTSL 3 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 IFT20-216ENST00000588477 774 ntTSL 5 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UPK3BQ9BT76 HADH-212ENST00000638621 741 ntTSL 5 BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms