Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 ARSEP1-201ENST00000420443 635 ntBASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 AP001582.1-201ENST00000525856 295 ntBASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 PTP4A1P2-201ENST00000546033 454 ntBASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 AL359881.2-201ENST00000602973 570 ntBASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 AC107373.2-201ENST00000607735 490 ntBASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 LINC01101-201ENST00000622953 1884 ntBASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 AC117489.1-201ENST00000625169 3217 ntBASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PCGF1Q9BSM1 AC126365.1-201ENST00000578585 1514 ntBASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 ACA64.2-201ENST00000459014 129 ntBASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 SLC25A47P1-201ENST00000531577 414 ntBASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 MIR5189-201ENST00000577370 114 ntBASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 BTNL10-201ENST00000595971 695 ntBASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
PCGF1Q9BSM1 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
PCGF1Q9BSM1 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms