Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHOX2BQ99453 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHOX2BQ99453 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PHOX2BQ99453 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHOX2BQ99453 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PHOX2BQ99453 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.3■□□□□ 0.04
PHOX2BQ99453 AC144831.1-201ENST00000573312 2656 ntBASIC15.3■□□□□ 0.04
PHOX2BQ99453 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHOX2BQ99453 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.3■□□□□ 0.04
PHOX2BQ99453 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHOX2BQ99453 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHOX2BQ99453 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHOX2BQ99453 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PHOX2BQ99453 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHOX2BQ99453 Z97985.1-201ENST00000332270 946 ntBASIC15.3■□□□□ 0.04
PHOX2BQ99453 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PHOX2BQ99453 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PHOX2BQ99453 OR2K2-202ENST00000374428 1038 ntBASIC15.3■□□□□ 0.04
PHOX2BQ99453 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.3■□□□□ 0.04
PHOX2BQ99453 ACTBP8-201ENST00000403258 1108 ntBASIC15.3■□□□□ 0.04
PHOX2BQ99453 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHOX2BQ99453 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.3■□□□□ 0.04
PHOX2BQ99453 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.3■□□□□ 0.04
PHOX2BQ99453 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PHOX2BQ99453 SERBP1P2-201ENST00000436888 1164 ntBASIC15.3■□□□□ 0.04
PHOX2BQ99453 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHOX2BQ99453 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PHOX2BQ99453 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.3■□□□□ 0.04
PHOX2BQ99453 SCARNA21-201ENST00000517026 139 ntBASIC15.3■□□□□ 0.04
PHOX2BQ99453 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.3■□□□□ 0.04
PHOX2BQ99453 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.3■□□□□ 0.04
PHOX2BQ99453 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.3■□□□□ 0.04
PHOX2BQ99453 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC15.3■□□□□ 0.04
PHOX2BQ99453 MIR5196-201ENST00000578146 115 ntBASIC15.3■□□□□ 0.04
PHOX2BQ99453 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC15.3■□□□□ 0.04
PHOX2BQ99453 LINC00431-202ENST00000636375 159 ntBASIC15.3■□□□□ 0.04
PHOX2BQ99453 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHOX2BQ99453 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.3■□□□□ 0.04
PHOX2BQ99453 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHOX2BQ99453 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHOX2BQ99453 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHOX2BQ99453 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PHOX2BQ99453 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHOX2BQ99453 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHOX2BQ99453 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHOX2BQ99453 AC243964.3-201ENST00000623022 2028 ntBASIC15.29■□□□□ 0.04
PHOX2BQ99453 REXO1L1P-202ENST00000608646 1974 ntBASIC15.29■□□□□ 0.04
PHOX2BQ99453 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHOX2BQ99453 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHOX2BQ99453 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHOX2BQ99453 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHOX2BQ99453 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PHOX2BQ99453 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PHOX2BQ99453 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PHOX2BQ99453 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHOX2BQ99453 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 UROS-201ENST00000368774 744 ntTSL 2 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 KLF2P2-201ENST00000416807 1039 ntBASIC15.29■□□□□ 0.04
PHOX2BQ99453 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 HCG27-204ENST00000424675 895 ntTSL 3 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PHOX2BQ99453 AC090857.1-201ENST00000527400 390 ntBASIC15.29■□□□□ 0.04
PHOX2BQ99453 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHOX2BQ99453 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 AL031713.1-201ENST00000564813 661 ntBASIC15.29■□□□□ 0.04
PHOX2BQ99453 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 AC068587.8-201ENST00000641239 219 ntBASIC15.29■□□□□ 0.04
PHOX2BQ99453 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHOX2BQ99453 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PHOX2BQ99453 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PHOX2BQ99453 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHOX2BQ99453 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PHOX2BQ99453 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PHOX2BQ99453 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms