Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSPG4P5Q96PW8 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 SALL4P5-201ENST00000419001 1760 ntBASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 AL512384.1-201ENST00000406683 331 ntBASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 TMEM14DP-201ENST00000422205 345 ntBASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 TLE1P1-201ENST00000422965 589 ntBASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 AC007969.1-201ENST00000433675 447 ntBASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 AC245100.3-201ENST00000441281 285 ntBASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 USP32P1-208ENST00000506594 1164 ntBASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 AC132938.2-201ENST00000579188 680 ntBASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 GNRHR2-203ENST00000581100 1187 ntBASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 AC015936.2-201ENST00000593177 259 ntBASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 AL358472.5-202ENST00000641448 1267 ntBASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 AL591163.1-201ENST00000641757 987 ntBASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CSPG4P5Q96PW8 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 AL354702.1-201ENST00000442006 1960 ntBASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 AC005229.1-201ENST00000392885 409 ntBASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 POM121L8P-201ENST00000417732 1281 ntBASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 POM121L9P-203ENST00000441984 1285 ntBASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 SLC25A47P1-201ENST00000531577 414 ntBASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 RN7SL48P-201ENST00000579283 293 ntBASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 AC008735.3-201ENST00000596646 500 ntBASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 IGHV3-72-202ENST00000621503 303 ntBASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 ENPP7P14-201ENST00000621765 1040 ntBASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 CU639417.3-201ENST00000624240 1404 ntBASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CSPG4P5Q96PW8 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms