Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM11Q96F44 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TRIM11Q96F44 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM11Q96F44 AC015802.1-201ENST00000588104 1449 ntBASIC15.96■□□□□ 0.15
TRIM11Q96F44 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM11Q96F44 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
TRIM11Q96F44 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM11Q96F44 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.96■□□□□ 0.15
TRIM11Q96F44 AC055811.4-201ENST00000624039 1754 ntBASIC15.96■□□□□ 0.15
TRIM11Q96F44 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRIM11Q96F44 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM11Q96F44 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM11Q96F44 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.96■□□□□ 0.15
TRIM11Q96F44 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM11Q96F44 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRIM11Q96F44 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.96■□□□□ 0.15
TRIM11Q96F44 KLF2P2-201ENST00000416807 1039 ntBASIC15.96■□□□□ 0.15
TRIM11Q96F44 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.96■□□□□ 0.15
TRIM11Q96F44 GIMAP3P-201ENST00000495150 836 ntBASIC15.96■□□□□ 0.15
TRIM11Q96F44 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.96■□□□□ 0.15
TRIM11Q96F44 ENPP7P5-201ENST00000541031 1031 ntBASIC15.96■□□□□ 0.15
TRIM11Q96F44 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.96■□□□□ 0.15
TRIM11Q96F44 AL359711.2-201ENST00000563105 872 ntBASIC15.96■□□□□ 0.15
TRIM11Q96F44 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM11Q96F44 AL132655.2-201ENST00000596276 594 ntBASIC15.96■□□□□ 0.15
TRIM11Q96F44 AC004233.3-201ENST00000607794 1269 ntBASIC15.96■□□□□ 0.15
TRIM11Q96F44 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRIM11Q96F44 AP005019.2-201ENST00000615104 511 ntBASIC15.96■□□□□ 0.15
TRIM11Q96F44 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.96■□□□□ 0.15
TRIM11Q96F44 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM11Q96F44 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.96■□□□□ 0.15
TRIM11Q96F44 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM11Q96F44 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM11Q96F44 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM11Q96F44 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.96■□□□□ 0.15
TRIM11Q96F44 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM11Q96F44 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.96■□□□□ 0.15
TRIM11Q96F44 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM11Q96F44 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRIM11Q96F44 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.96■□□□□ 0.14
TRIM11Q96F44 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRIM11Q96F44 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
TRIM11Q96F44 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRIM11Q96F44 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRIM11Q96F44 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRIM11Q96F44 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRIM11Q96F44 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRIM11Q96F44 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM11Q96F44 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM11Q96F44 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM11Q96F44 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM11Q96F44 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM11Q96F44 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM11Q96F44 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM11Q96F44 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM11Q96F44 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM11Q96F44 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM11Q96F44 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM11Q96F44 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM11Q96F44 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 FAM207CP-201ENST00000443486 507 ntBASIC15.95■□□□□ 0.14
TRIM11Q96F44 SERBP1P5-201ENST00000510079 1181 ntBASIC15.95■□□□□ 0.14
TRIM11Q96F44 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM11Q96F44 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM11Q96F44 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM11Q96F44 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM11Q96F44 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM11Q96F44 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM11Q96F44 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM11Q96F44 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM11Q96F44 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM11Q96F44 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM11Q96F44 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM11Q96F44 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM11Q96F44 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms