Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC11.28□□□□□ -0.6
RNF183Q96D59 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
RNF183Q96D59 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC11.28□□□□□ -0.6
RNF183Q96D59 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
RNF183Q96D59 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC11.28□□□□□ -0.6
RNF183Q96D59 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
RNF183Q96D59 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
RNF183Q96D59 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
RNF183Q96D59 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
RNF183Q96D59 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC11.28□□□□□ -0.6
RNF183Q96D59 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
RNF183Q96D59 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
RNF183Q96D59 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
RNF183Q96D59 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 ACKR1-201ENST00000368121 1240 ntBASIC11.28□□□□□ -0.6
RNF183Q96D59 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 BRF1-202ENST00000379932 884 ntTSL 5 BASIC11.28□□□□□ -0.6
RNF183Q96D59 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC11.28□□□□□ -0.6
RNF183Q96D59 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 MIR1909-201ENST00000411312 80 ntBASIC11.28□□□□□ -0.6
RNF183Q96D59 BAATP1-201ENST00000412284 1225 ntBASIC11.28□□□□□ -0.6
RNF183Q96D59 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
RNF183Q96D59 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC11.28□□□□□ -0.6
RNF183Q96D59 AC022210.1-201ENST00000449856 793 ntBASIC11.28□□□□□ -0.6
RNF183Q96D59 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
RNF183Q96D59 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
RNF183Q96D59 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
RNF183Q96D59 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
RNF183Q96D59 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC11.28□□□□□ -0.6
RNF183Q96D59 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC11.28□□□□□ -0.6
RNF183Q96D59 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC11.28□□□□□ -0.6
RNF183Q96D59 CLUHP6-201ENST00000580789 941 ntBASIC11.28□□□□□ -0.6
RNF183Q96D59 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC11.28□□□□□ -0.6
RNF183Q96D59 TBCB-211ENST00000589996 724 ntTSL 3 BASIC11.28□□□□□ -0.6
RNF183Q96D59 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
RNF183Q96D59 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC11.28□□□□□ -0.6
RNF183Q96D59 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC11.28□□□□□ -0.6
RNF183Q96D59 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.28□□□□□ -0.6
RNF183Q96D59 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
RNF183Q96D59 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC11.28□□□□□ -0.6
RNF183Q96D59 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
RNF183Q96D59 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
RNF183Q96D59 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
RNF183Q96D59 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC11.28□□□□□ -0.6
RNF183Q96D59 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
RNF183Q96D59 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
RNF183Q96D59 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF183Q96D59 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
RNF183Q96D59 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
RNF183Q96D59 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC11.27□□□□□ -0.6
RNF183Q96D59 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
RNF183Q96D59 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
RNF183Q96D59 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
RNF183Q96D59 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RNF183Q96D59 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RNF183Q96D59 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
RNF183Q96D59 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
RNF183Q96D59 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RNF183Q96D59 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC11.27□□□□□ -0.61
RNF183Q96D59 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC11.27□□□□□ -0.61
RNF183Q96D59 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RNF183Q96D59 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
RNF183Q96D59 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
RNF183Q96D59 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
RNF183Q96D59 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC11.27□□□□□ -0.61
RNF183Q96D59 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
RNF183Q96D59 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC11.27□□□□□ -0.61
RNF183Q96D59 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC11.27□□□□□ -0.61
RNF183Q96D59 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RNF183Q96D59 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.27□□□□□ -0.61
RNF183Q96D59 AC093433.1-201ENST00000458048 571 ntBASIC11.27□□□□□ -0.61
RNF183Q96D59 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms