Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.58□□□□□ -0.24
CPNE4Q96A23 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CPNE4Q96A23 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CPNE4Q96A23 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.57□□□□□ -0.24
CPNE4Q96A23 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CPNE4Q96A23 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.57□□□□□ -0.24
CPNE4Q96A23 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.57□□□□□ -0.24
CPNE4Q96A23 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.57□□□□□ -0.24
CPNE4Q96A23 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.57□□□□□ -0.24
CPNE4Q96A23 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.57□□□□□ -0.24
CPNE4Q96A23 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.57□□□□□ -0.24
CPNE4Q96A23 KLF2P4-201ENST00000451959 1225 ntBASIC13.57□□□□□ -0.24
CPNE4Q96A23 CROCCP4-201ENST00000457096 498 ntBASIC13.57□□□□□ -0.24
CPNE4Q96A23 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.57□□□□□ -0.24
CPNE4Q96A23 AC104989.1-201ENST00000519711 778 ntBASIC13.57□□□□□ -0.24
CPNE4Q96A23 IGHV3-71-201ENST00000523324 359 ntBASIC13.57□□□□□ -0.24
CPNE4Q96A23 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.57□□□□□ -0.24
CPNE4Q96A23 HILS1-202ENST00000545329 423 ntBASIC13.57□□□□□ -0.24
CPNE4Q96A23 KRT90P-201ENST00000549264 1064 ntBASIC13.57□□□□□ -0.24
CPNE4Q96A23 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.57□□□□□ -0.24
CPNE4Q96A23 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CPNE4Q96A23 MIR6805-201ENST00000615055 62 ntBASIC13.57□□□□□ -0.24
CPNE4Q96A23 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CPNE4Q96A23 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CPNE4Q96A23 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CPNE4Q96A23 PDIA3P1-201ENST00000471856 1510 ntBASIC13.57□□□□□ -0.24
CPNE4Q96A23 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.57□□□□□ -0.24
CPNE4Q96A23 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.57□□□□□ -0.24
CPNE4Q96A23 AL359258.3-201ENST00000622910 2331 ntBASIC13.57□□□□□ -0.24
CPNE4Q96A23 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
CPNE4Q96A23 AL137783.1-201ENST00000623494 1896 ntBASIC13.57□□□□□ -0.24
CPNE4Q96A23 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CPNE4Q96A23 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE4Q96A23 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE4Q96A23 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE4Q96A23 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE4Q96A23 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE4Q96A23 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE4Q96A23 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE4Q96A23 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE4Q96A23 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE4Q96A23 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE4Q96A23 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE4Q96A23 TPM3P8-201ENST00000330554 643 ntBASIC13.56□□□□□ -0.24
CPNE4Q96A23 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE4Q96A23 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 ARSEP1-201ENST00000420443 635 ntBASIC13.56□□□□□ -0.24
CPNE4Q96A23 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE4Q96A23 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 AC245100.3-201ENST00000441281 285 ntBASIC13.56□□□□□ -0.24
CPNE4Q96A23 ATP5G2P4-201ENST00000442175 420 ntBASIC13.56□□□□□ -0.24
CPNE4Q96A23 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 RNA5SP486-201ENST00000515961 83 ntBASIC13.56□□□□□ -0.24
CPNE4Q96A23 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 AC079316.1-201ENST00000548397 411 ntBASIC13.56□□□□□ -0.24
CPNE4Q96A23 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 AP005482.1-201ENST00000563722 1273 ntBASIC13.56□□□□□ -0.24
CPNE4Q96A23 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 ENPP7P14-201ENST00000621765 1040 ntBASIC13.56□□□□□ -0.24
CPNE4Q96A23 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms