Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 AC074338.1-201ENST00000416825 156 ntBASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 CNN2P11-201ENST00000429351 262 ntBASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 KRT18P64-201ENST00000434946 1219 ntBASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 HLA-V-204ENST00000476601 1289 ntBASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 AC025048.3-201ENST00000590609 569 ntBASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 AC005702.4-201ENST00000618393 416 ntBASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 AC092135.3-201ENST00000624151 1846 ntBASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
DNAAF1Q8NEP3 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
DNAAF1Q8NEP3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.33□□□□□ -0.27
DNAAF1Q8NEP3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
DNAAF1Q8NEP3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
DNAAF1Q8NEP3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
DNAAF1Q8NEP3 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
DNAAF1Q8NEP3 AL359881.3-201ENST00000602640 1721 ntBASIC13.33□□□□□ -0.27
DNAAF1Q8NEP3 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.33□□□□□ -0.27
DNAAF1Q8NEP3 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
DNAAF1Q8NEP3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 AC015922.1-201ENST00000421102 1152 ntBASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 AC107918.4-201ENST00000641966 3141 ntBASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DNAAF1Q8NEP3 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms