Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
LSMEM1Q8N8F7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 DFFBP1-201ENST00000433250 979 ntBASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 AL603764.1-201ENST00000636452 321 ntBASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.86□□□□□ -0.19
LSMEM1Q8N8F7 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 AL139094.1-201ENST00000405549 1188 ntBASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LSMEM1Q8N8F7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms