Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC006058.4-201ENST00000624016 1670 ntBASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBE3BQ7Z3V4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 AC016700.1-201ENST00000429424 312 ntBASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 GCOM2-201ENST00000509133 1104 ntBASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 AC131206.1-201ENST00000538078 1211 ntBASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 AC100827.2-201ENST00000563214 1194 ntBASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 AL606495.2-201ENST00000605867 535 ntBASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 AC007292.2-201ENST00000593524 1812 ntBASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
UBE3BQ7Z3V4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UBE3BQ7Z3V4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UBE3BQ7Z3V4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
UBE3BQ7Z3V4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 TPI1-206ENST00000488464 791 ntTSL 5 BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 BNIP3P13-201ENST00000599968 566 ntBASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 AL023803.2-201ENST00000620080 638 ntBASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
UBE3BQ7Z3V4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBE3BQ7Z3V4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
UBE3BQ7Z3V4 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBE3BQ7Z3V4 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC18.63■□□□□ 0.57
UBE3BQ7Z3V4 AC004899.1-201ENST00000424687 1714 ntBASIC18.63■□□□□ 0.57
UBE3BQ7Z3V4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
UBE3BQ7Z3V4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.63■□□□□ 0.57
UBE3BQ7Z3V4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBE3BQ7Z3V4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
UBE3BQ7Z3V4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBE3BQ7Z3V4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBE3BQ7Z3V4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC18.63■□□□□ 0.57
UBE3BQ7Z3V4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBE3BQ7Z3V4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBE3BQ7Z3V4 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
UBE3BQ7Z3V4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
UBE3BQ7Z3V4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
UBE3BQ7Z3V4 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBE3BQ7Z3V4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
UBE3BQ7Z3V4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
UBE3BQ7Z3V4 KLF2P1-201ENST00000447438 1042 ntBASIC18.63■□□□□ 0.57
UBE3BQ7Z3V4 AC005077.2-201ENST00000449786 690 ntBASIC18.63■□□□□ 0.57
UBE3BQ7Z3V4 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.63■□□□□ 0.57
UBE3BQ7Z3V4 HNRNPA1P36-201ENST00000521313 955 ntBASIC18.63■□□□□ 0.57
UBE3BQ7Z3V4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms