Protein–RNA interactions for Protein: Q6PIY5

C1orf228, Uncharacterized protein C1orf228, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228Q6PIY5 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
C1orf228Q6PIY5 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 KRT8P13-201ENST00000463294 1010 ntBASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 AC026410.3-201ENST00000514280 936 ntBASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
C1orf228Q6PIY5 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 AL121723.1-201ENST00000445194 1519 ntBASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 AL133267.1-201ENST00000398220 340 ntBASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.04■□□□□ 0.16
C1orf228Q6PIY5 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 MIR1247-201ENST00000408206 136 ntBASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 GPAA1P2-201ENST00000417923 928 ntBASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 CNN2P8-201ENST00000421872 913 ntBASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 KRT18P25-201ENST00000508931 1278 ntBASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.03■□□□□ 0.16
C1orf228Q6PIY5 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms