Protein–RNA interactions for Protein: Q587I9

SFT2D3, Vesicle transport protein SFT2C, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D3Q587I9 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SFT2D3Q587I9 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SFT2D3Q587I9 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 AC105206.1-202ENST00000314927 2368 ntBASIC14.81□□□□□ -0.04
SFT2D3Q587I9 PPT1-213ENST00000641319 2388 ntBASIC14.81□□□□□ -0.04
SFT2D3Q587I9 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 HNRNPUP1-201ENST00000554987 333 ntBASIC14.81□□□□□ -0.04
SFT2D3Q587I9 SPDYE22P-201ENST00000582158 798 ntBASIC14.81□□□□□ -0.04
SFT2D3Q587I9 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.81□□□□□ -0.04
SFT2D3Q587I9 AF228730.6-201ENST00000641497 218 ntBASIC14.81□□□□□ -0.04
SFT2D3Q587I9 AC084121.3-201ENST00000641716 218 ntBASIC14.81□□□□□ -0.04
SFT2D3Q587I9 AC105233.6-201ENST00000642093 218 ntBASIC14.81□□□□□ -0.04
SFT2D3Q587I9 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 SBF1P1-201ENST00000444527 5631 ntBASIC14.81□□□□□ -0.04
SFT2D3Q587I9 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SFT2D3Q587I9 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 OR2I1P-209ENST00000641730 5365 ntBASIC14.8□□□□□ -0.04
SFT2D3Q587I9 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 AC087499.6-201ENST00000411576 835 ntBASIC14.8□□□□□ -0.04
SFT2D3Q587I9 AC074338.1-201ENST00000416825 156 ntBASIC14.8□□□□□ -0.04
SFT2D3Q587I9 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 MEIS3P1-201ENST00000495167 958 ntBASIC14.8□□□□□ -0.04
SFT2D3Q587I9 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 AC055876.2-201ENST00000531834 546 ntBASIC14.8□□□□□ -0.04
SFT2D3Q587I9 API5-211ENST00000534695 560 ntTSL 5 BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 AC023310.3-201ENST00000557027 670 ntBASIC14.8□□□□□ -0.04
SFT2D3Q587I9 AC100756.1-201ENST00000562736 682 ntBASIC14.8□□□□□ -0.04
SFT2D3Q587I9 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 AC138749.3-201ENST00000567691 622 ntBASIC14.8□□□□□ -0.04
SFT2D3Q587I9 AC116165.1-201ENST00000611806 668 ntBASIC14.8□□□□□ -0.04
SFT2D3Q587I9 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 AL391825.1-201ENST00000457671 1364 ntBASIC14.8□□□□□ -0.04
SFT2D3Q587I9 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms