Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDCA8Q53HL2 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDCA8Q53HL2 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CDCA8Q53HL2 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDCA8Q53HL2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CDCA8Q53HL2 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDCA8Q53HL2 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDCA8Q53HL2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 MRPL37P1-201ENST00000592451 1337 ntBASIC20.63■□□□□ 0.89
CDCA8Q53HL2 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 PTPA-218ENST00000435132 618 ntTSL 2 BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 AC006033.1-201ENST00000440505 426 ntBASIC20.63■□□□□ 0.89
CDCA8Q53HL2 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 AL035414.1-201ENST00000451327 857 ntBASIC20.63■□□□□ 0.89
CDCA8Q53HL2 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 MIR4525-201ENST00000580000 75 ntBASIC20.63■□□□□ 0.89
CDCA8Q53HL2 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 AC009955.4-201ENST00000597192 544 ntBASIC20.63■□□□□ 0.89
CDCA8Q53HL2 AL022328.3-201ENST00000607943 679 ntBASIC20.63■□□□□ 0.89
CDCA8Q53HL2 AL023803.2-201ENST00000620080 638 ntBASIC20.63■□□□□ 0.89
CDCA8Q53HL2 NFIC-211ENST00000641145 8399 ntBASIC20.63■□□□□ 0.89
CDCA8Q53HL2 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDCA8Q53HL2 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 KRTAP10-13P-201ENST00000412914 571 ntBASIC20.62■□□□□ 0.89
CDCA8Q53HL2 AC004898.1-201ENST00000451057 766 ntBASIC20.62■□□□□ 0.89
CDCA8Q53HL2 AC104306.2-201ENST00000451877 341 ntBASIC20.62■□□□□ 0.89
CDCA8Q53HL2 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 CD74-212ENST00000524315 584 ntTSL 5 BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 AC092135.3-201ENST00000624151 1846 ntBASIC20.62■□□□□ 0.89
CDCA8Q53HL2 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCA8Q53HL2 LINC00554-201ENST00000564841 3011 ntBASIC20.62■□□□□ 0.89
CDCA8Q53HL2 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC20.61■□□□□ 0.89
CDCA8Q53HL2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDCA8Q53HL2 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC20.61■□□□□ 0.89
CDCA8Q53HL2 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDCA8Q53HL2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDCA8Q53HL2 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDCA8Q53HL2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDCA8Q53HL2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDCA8Q53HL2 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC20.61■□□□□ 0.89
CDCA8Q53HL2 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDCA8Q53HL2 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDCA8Q53HL2 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC20.61■□□□□ 0.89
CDCA8Q53HL2 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CDCA8Q53HL2 HNRNPA1P63-201ENST00000427917 963 ntBASIC20.61■□□□□ 0.89
CDCA8Q53HL2 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
CDCA8Q53HL2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC20.61■□□□□ 0.89
CDCA8Q53HL2 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDCA8Q53HL2 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms