Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 MIR33B-201ENST00000385104 96 ntBASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 FXNP2-201ENST00000411625 547 ntBASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 PRKXP1-201ENST00000561423 1122 ntBASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 AC020922.3-201ENST00000595064 547 ntBASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 AL132994.2-201ENST00000603120 687 ntBASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 LINC00528-201ENST00000600723 2160 ntBASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHROOM1Q2M3G4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SHROOM1Q2M3G4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SHROOM1Q2M3G4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
SHROOM1Q2M3G4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SHROOM1Q2M3G4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 AL161670.2-201ENST00000557650 1227 ntBASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 MEG3_2.1-201ENST00000611456 105 ntBASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 AP000346.4-201ENST00000614827 381 ntBASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 AC100757.4-201ENST00000626934 759 ntBASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHROOM1Q2M3G4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHROOM1Q2M3G4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHROOM1Q2M3G4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHROOM1Q2M3G4 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SHROOM1Q2M3G4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SHROOM1Q2M3G4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SHROOM1Q2M3G4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHROOM1Q2M3G4 AL109954.1-202ENST00000564051 2148 ntBASIC17.38■□□□□ 0.37
SHROOM1Q2M3G4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHROOM1Q2M3G4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.38■□□□□ 0.37
SHROOM1Q2M3G4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHROOM1Q2M3G4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.38■□□□□ 0.37
SHROOM1Q2M3G4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SHROOM1Q2M3G4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHROOM1Q2M3G4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHROOM1Q2M3G4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SHROOM1Q2M3G4 RN7SKP214-201ENST00000364208 315 ntBASIC17.38■□□□□ 0.37
SHROOM1Q2M3G4 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms